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S10_scaffold_1632_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1632_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..1520
DNA (1518bp) protein (506aa)
Pyruvate,phosphate dikinase {ECO:0000313|EMBL:AKB82610.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AKB82610.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Pyruvate,phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CN6_METBF rbh
S10_scaffold_1632_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1794..1934)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q7C9_METMZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF98250.1}; TaxID=1236903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
S10_scaffold_1632_curated_3
unknown

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comp(2433..2597)
DNA (165bp) protein (55aa)

This feature has no annotations

S10_scaffold_1632_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3383..4348)
DNA (966bp) protein (322aa)
Geranylfarnesyl diphosphate synthase {ECO:0000313|EMBL:AKB82612.1}; EC=2.5.1.1 {ECO:0000313|EMBL:AKB82612.1};; EC=2.5.1.10 {ECO:0000313|EMBL:AKB82612.1};; EC=2.5.1.29 {ECO:0000313|EMBL:AKB82612.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Geranylfarnesyl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29)
Farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL6_METBF rbh
S10_scaffold_1632_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4384..5727)
DNA (1344bp) protein (448aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Metallo-beta-lactamase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL5_METBF rbh
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster
S10_scaffold_1632_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7091..8188)
DNA (1098bp) protein (366aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=IDI2_METBF rbh
S10_scaffold_1632_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8192..8974)
DNA (783bp) protein (261aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Isopentenyl phosphate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL3_METBF rbh
Isopentenyl phosphate kinase
S10_scaffold_1632_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9072..9977)
DNA (906bp) protein (302aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL2_METBF rbh
S10_scaffold_1632_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10411..11151)
DNA (741bp) protein (247aa)
MEMO1 family protein Mbar_A1422 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y1422_METBF rbh
MEMO1 family protein MSBR3_2039 {ECO:0000256|HAMAP-Rule:MF_00055}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
Displaying 9 items

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