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S10_scaffold_1479_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1479_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..831
DNA (831bp) protein (277aa)
UPF0280 protein MA_1715 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Y1715_METAC rbh
UPF0280 protein MSBR3_1407 {ECO:0000256|HAMAP-Rule:MF_01079}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1479_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1107..1676
DNA (570bp) protein (190aa)
Putative intracellular protease n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y3_METBF rbh
ThiJ/PfpI family protein {ECO:0000313|EMBL:AKB81986.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ThiJ/PfpI family protein
S10_scaffold_1479_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1997..2839)
DNA (843bp) protein (281aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NQE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AKB81987.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
NADP oxidoreductase coenzyme F420-dependent
S10_scaffold_1479_curated_trna_1
unknown

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3602..3675
DNA (74bp)
transferRNA Lys
S10_scaffold_1479_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3770..4006
DNA (237bp) protein (79aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RPOH_METBF
S10_scaffold_1479_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4217..5812
DNA (1596bp) protein (532aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:AKB81989.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKB81989.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit B n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y5_METBF rbh
S10_scaffold_1479_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5827..10296
DNA (4470bp) protein (1490aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y7_METBF rbh
S10_scaffold_1479_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10296..11480
DNA (1185bp) protein (395aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit A n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y8_METBF rbh
S10_scaffold_1479_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11738..12028
DNA (291bp) protein (97aa)
50S ribosomal protein L30e n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y9_METBF
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
LSU ribosomal protein L30e
S10_scaffold_1479_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12049..12474
DNA (426bp) protein (142aa)
Transcription termination factor NusA n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Z0_METBF
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
transcription elongation factor NusA-like protein
S10_scaffold_1479_curated_10
unknown

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12579..12653
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 11 items

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