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S28_scaffold_399_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_399_curated_1
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(346..801)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUN9_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKG25334.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein
S28_scaffold_399_curated_2
unknown

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comp(824..1090)
DNA (267bp) protein (89aa)

This feature has no annotations

S28_scaffold_399_curated_3
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1568..2392)
DNA (825bp) protein (275aa)
Zinc ABC transporter, permease protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PX87_METMA rbh
Zinc ABC transporter, inner membrane permease protein ZnuB {ECO:0000313|EMBL:AKB23449.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
Zinc ABC transporter, inner membrane permease protein ZnuB
S28_scaffold_399_curated_4
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2441..3205)
DNA (765bp) protein (255aa)
Zinc ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUP1_METAC rbh
Zinc ABC transporter, ATP-binding protein ZnuC
Zinc ABC transporter, ATP-binding protein ZnuC {ECO:0000313|EMBL:AKB76366.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_399_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3289..4251)
DNA (963bp) protein (321aa)
Zinc ABC transporter, periplasmic-binding protein ZnuA n=2 Tax=Methanosarcina mazei RepID=M1QIG1_METMZ rbh
Zinc ABC transporter, periplasmic-binding protein ZnuA {ECO:0000313|EMBL:AKB80558.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Zinc ABC transporter, periplasmic-binding protein ZnuA rbh
S28_scaffold_399_curated_6
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4476..4964)
DNA (489bp) protein (163aa)
Iron dependent repressor n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUP3_METAC rbh
DNA-binding protein {ECO:0000313|EMBL:KKG12897.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
iron dependent repressor rbh
S28_scaffold_399_curated_7
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5267..6664)
DNA (1398bp) protein (466aa)
High-affinity gluconate transporter (Gluconate permease) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUP4_METAC rbh
Putative permease {ECO:0000313|EMBL:AKB30633.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
high-affinity gluconate transporter rbh
S28_scaffold_399_curated_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6870..7502)
DNA (633bp) protein (211aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PWX7_METMZ rbh
Positive regulator of CheA protein activity (CheW) rbh
Positive regulator of CheA protein activity (CheW) {ECO:0000313|EMBL:AKB66528.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
S28_scaffold_399_curated_9
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7672..9741)
DNA (2070bp) protein (690aa)
Methyl-accepting chemotaxis protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q397_METMZ rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AKB80564.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Methyl-accepting chemotaxis protein rbh
S28_scaffold_399_curated_10
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10080..10469)
DNA (390bp) protein (130aa)
Response regulator receiver n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUP7_METAC
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AAM03472.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_399_curated_11
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11682..12047
DNA (366bp) protein (122aa)
Chemotaxis response regulator n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUP9_METAC
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY {ECO:0000313|EMBL:AKB76359.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_399_curated_12
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12434..13504
DNA (1071bp) protein (357aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=CHEB2_METAC rbh
cheB2; chemotaxis protein-glutamate methylesterase rbh
S28_scaffold_399_curated_13
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13697..14245
DNA (549bp) protein (183aa)
Signal transduction histidine kinase CheA (EC:2.7.3.-)
Chemotaxis sensor histidine kinase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUQ1_METAC
Chemotaxis protein {ECO:0000313|EMBL:KKG12890.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
Displaying 13 items

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