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S28_scaffold_775_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_775_curated_1
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..144
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PB33_METMZ
transmembrane protein
Membrane protein {ECO:0000313|EMBL:KKG13433.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
S28_scaffold_775_curated_2
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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215..649
DNA (435bp) protein (145aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=MTIP_METAC
S-methyl-5'-thioinosine phosphorylase {ECO:0000313|EMBL:KKG20732.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
S28_scaffold_775_curated_3
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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754..1023
DNA (270bp) protein (90aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=MTIP_METAC
S-methyl-5'-thioinosine phosphorylase {ECO:0000313|EMBL:KKG20732.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
S28_scaffold_775_curated_4
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2407..4257
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQX6_METAC rbh
Putative ski2-type helicase {ECO:0000313|EMBL:AKB17919.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein rbh
S28_scaffold_775_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4436..4837
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q5W3_METMZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB69334.1}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
S28_scaffold_775_curated_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5701..6108
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1QBX1_METMZ
hypothetical protein
Conserved protein {ECO:0000313|EMBL:AAM32080.1}; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 /; JCM 11833 / OCM 88) (Methanosarcina frisia).;"
S28_scaffold_775_curated_trna_1
unknown

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6319..6393
DNA (75bp)
transferRNA Glu
S28_scaffold_775_curated_trna_2
unknown

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6695..6769
DNA (75bp)
transferRNA Glu
S28_scaffold_775_curated_7
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6970..7881)
DNA (912bp) protein (304aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8PUE9_METMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKH93656.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
hypothetical protein
S28_scaffold_775_curated_8
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8330..8854
DNA (525bp) protein (175aa)
Substrate-specific component TrpP of tryptophan ECF transporter n=2 Tax=Methanosarcina mazei RepID=M1PB42_METMZ
Substrate-specific component TrpP of tryptophan ECF transporter {ECO:0000313|EMBL:AKB17926.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
Substrate-specific component TrpP of tryptophan ECF transporter
S28_scaffold_775_curated_9
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8858..9400
DNA (543bp) protein (181aa)
Putative ABC transporter ATP-binding protein MM_2387 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Y2387_METMA
Duplicated ATPase component of energizing module of predicted tryptophan ECF transporter {ECO:0000313|EMBL:AKB21267.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
cbiO; cobalt transport ATP-binding protein
Displaying 11 items

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