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S28_scaffold_570_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_570_curated_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..335
DNA (333bp) protein (111aa)
Transposase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW15_METHD
Uncharacterized protein {ECO:0000313|EMBL:KKG72663.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
transposase
S28_scaffold_570_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(367..1140)
DNA (774bp) protein (258aa)
Fe(III) dicitrate ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q6_METBF rbh
Iron(III) dicitrate transport ATP-binding protein FecE
Iron(III) dicitrate transport ATP-binding protein FecE {ECO:0000313|EMBL:AKB51245.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S28_scaffold_570_curated_3
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1137..2180)
DNA (1044bp) protein (348aa)
Fe(III) dicitrate ABC transporter, permease n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q5_METBF rbh
Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:AKB36751.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
Iron(III) dicitrate transport system permease protein FecD
S28_scaffold_570_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2186..3460)
DNA (1275bp) protein (425aa)
Putative iron complex transport system substrate-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q4_METBF rbh
putative iron complex transport system substrate-binding protein rbh
Putative iron complex transport system substrate-binding protein {ECO:0000313|EMBL:AAZ71638.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S28_scaffold_570_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3493..3936)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q3_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83822.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S28_scaffold_570_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4364..5200)
DNA (837bp) protein (279aa)
Methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q2_METBF rbh
Methyltransferase {ECO:0000313|EMBL:AKB83821.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
methyltransferase rbh
S28_scaffold_570_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5956..6765
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EI4_METBF rbh
Biotin synthesis protein BioC {ECO:0000313|EMBL:AKB78950.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Biotin synthesis protein BioC
S28_scaffold_570_curated_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7514..7891)
DNA (378bp) protein (126aa)
Sensory transduction histidine kinase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TM82_METAC
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AKB78284.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
sensory transduction histidine kinase
Displaying 8 items

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