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S28_scaffold_846_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_846_curated_1
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..878)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJR7_METAC rbh
Radical SAM protein {ECO:0000313|EMBL:KKG11179.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
His-Xaa-Ser system radical SAM maturase HxsC
S28_scaffold_846_curated_2
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(987..1580)
DNA (594bp) protein (198aa)
Ribosomal RNA adenine dimethylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUC4_METAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB48329.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
S28_scaffold_846_curated_3
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2140..2868
DNA (729bp) protein (243aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ88_METMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG11180.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein rbh
S28_scaffold_846_curated_4
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2925..3527)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q7A3_METMZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG11185.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
Hypothetical protein rbh
S28_scaffold_846_curated_5
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3832..4191
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1P6L3_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKG20183.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein
S28_scaffold_846_curated_6
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(4234..4788)
DNA (555bp) protein (185aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=NTPA_METAC rbh
Deoxyribonucleotide triphosphate pyrophosphatase {ECO:0000313|EMBL:KKG20182.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
putative deoxyribonucleotide triphosphate pyrophosphatase rbh
S28_scaffold_846_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4781..6469)
DNA (1689bp) protein (563aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q185_METMZ rbh
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
YgjD/Kae1/Qri7 family protein rbh
S28_scaffold_846_curated_8
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6703..8295)
DNA (1593bp) protein (531aa)
TPR-domain containing protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJS3_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG11189.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
TPR-domain containing protein
Displaying 8 items

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