ggKbase home page

S28_scaffold_965_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_965_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

139..357
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AN9_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82986.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S28_scaffold_965_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(354..1403)
DNA (1050bp) protein (350aa)
UPI0003D1BA16 related cluster n=1 Tax=unknown RepID=UPI0003D1BA16
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB55380.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S28_scaffold_965_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1372..1779)
DNA (408bp) protein (136aa)
UPI0003D1C5FB related cluster n=1 Tax=unknown RepID=UPI0003D1C5FB
Uncharacterized protein {ECO:0000313|EMBL:KKF98031.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
S28_scaffold_965_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1882..2106)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0D5_METMA
Uncharacterized protein {ECO:0000313|EMBL:AKB77802.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_965_curated_5
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2239..2484)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AP1_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB74606.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_965_curated_6
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2817..3989)
DNA (1173bp) protein (391aa)
Ornithine decarboxylase {ECO:0000313|EMBL:AKB78060.1}; EC=4.1.1.17 {ECO:0000313|EMBL:AKB78060.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
ornithine decarboxylase (EC:4.1.1.17) rbh
Ornithine decarboxylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS97_METMA rbh
S28_scaffold_965_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5259..5843)
DNA (585bp) protein (195aa)
Transporter n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS96_METMA rbh
Amino acid transporter {ECO:0000313|EMBL:AKB78059.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Amino acid transporter rbh
S28_scaffold_965_curated_8
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6883..7674
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKM3_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKG27536.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein
Displaying 8 items

View Taxonomy