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S28_scaffold_1142_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1142_curated_1
Methanosarcina sp. 2.H.T.1A.6, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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49..327
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVZ6_METMA
50S ribosomal protein L44 {ECO:0000313|EMBL:KKG23901.1}; TaxID=1483599 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.6.;"
rpl44e; 50S ribosomal protein L44
S28_scaffold_1142_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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334..522
DNA (189bp) protein (63aa)
30S ribosomal protein S27e n=3 Tax=Methanosarcina RepID=RS27_METAC
rps27e; 30S ribosomal protein S27
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
S28_scaffold_1142_curated_3
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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595..1401
DNA (807bp) protein (269aa)
Protein translation initiation factor 2 subunit alpha n=2 Tax=Methanosarcina mazei RepID=Q8PVZ7_METMA rbh
Eukaryotic translation initiation factor 2 alpha subunit {ECO:0000313|EMBL:AKB80057.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
translation initiation factor IF-2 subunit alpha rbh
S28_scaffold_1142_curated_4
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1574..2344
DNA (771bp) protein (257aa)
3-isopropylmalate dehydratase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT01_METAC rbh
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KKG09638.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
PAC2 family protein
S28_scaffold_1142_curated_5
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2454..3866
DNA (1413bp) protein (471aa)
DNA helicase II {ECO:0000313|EMBL:AKB23073.1}; EC=3.6.1.- {ECO:0000313|EMBL:AKB23073.1};; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
DNA helicase II (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT02_METAC rbh
S28_scaffold_1142_curated_trna_1
unknown

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4070..4152
DNA (83bp)
transferRNA Ser
S28_scaffold_1142_curated_6
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4484..4975
DNA (492bp) protein (164aa)
Rubrerythrin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT04_METAC rbh
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AKB73745.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_1142_curated_7
unknown

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5133..5447
DNA (315bp) protein (105aa)

This feature has no annotations

S28_scaffold_1142_curated_8
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7050..7685
DNA (636bp) protein (212aa)
S-layer-like protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT06_METAC
slpM; S-layer protein
Uncharacterized protein {ECO:0000313|EMBL:AKB35163.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
Displaying 9 items

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