ggKbase home page

S28_scaffold_2148_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_2148_curated_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

578..2257
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSE9_METAC rbh
Methylamine methyltransferase corrinoid protein reductive activase {ECO:0000313|EMBL:AKB79859.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_2148_curated_2
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2298..2663
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSF0_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB79860.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_2148_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2898..3344)
DNA (447bp) protein (149aa)
Putative cytosolic protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PA69_METMZ
putative cytosolic protein
Uncharacterized protein {ECO:0000313|EMBL:AKB41639.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei WWM610.;"
S28_scaffold_2148_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3572..3907)
DNA (336bp) protein (112aa)
UPF0702 transmembrane protein ycaP n=2 Tax=Yersinia enterocolitica RepID=F4N4L8_YEREN
Putative membrane protein {ECO:0000313|EMBL:AKB82345.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
putative inner membrane protein
S28_scaffold_2148_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5885..7165)
DNA (1281bp) protein (427aa)
Alkyl sulfatase or beta-lactamase {ECO:0000313|EMBL:AKB62553.1}; EC=3.1.6.- {ECO:0000313|EMBL:AKB62553.1};; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
Alkyl sulfatase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVI1_METMA rbh
Alkyl sulfatase rbh
S28_scaffold_2148_curated_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7302..7679)
DNA (378bp) protein (126aa)
Alkyl sulfatase or beta-lactamase {ECO:0000313|EMBL:AKB71612.1}; EC=3.1.6.- {ECO:0000313|EMBL:AKB71612.1};; TaxID=1434113 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei C16.;"
Alkyl sulfatase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVI1_METMA
Alkyl sulfatase
S28_scaffold_2148_curated_7
unknown

Not on your lists

8022..8261
DNA (240bp) protein (80aa)

This feature has no annotations

S28_scaffold_2148_curated_trna_1
unknown

Not on your lists

comp(8372..8481)
DNA (110bp)
transferRNA Met
S28_scaffold_2148_curated_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9301..9684
DNA (384bp) protein (128aa)
Formylmethanofuran dehydrogenase (Tungsten) subunit D {ECO:0000313|EMBL:AKB79865.1}; EC=1.2.99.5 {ECO:0000313|EMBL:AKB79865.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Formylmethanofuran dehydrogenase (Tungsten) subunit D n=2 Tax=Methanosarcina mazei RepID=M1QB19_METMZ
Formylmethanofuran dehydrogenase (tungsten) subunit D
S28_scaffold_2148_curated_9
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9761..11065
DNA (1305bp) protein (435aa)
Formylmethanofuran dehydrogenase subunit B {ECO:0000313|EMBL:AKB16334.1}; EC=1.2.99.5 {ECO:0000313|EMBL:AKB16334.1};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
Formylmethanofuran dehydrogenase, subunit B n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSG2_METAC rbh
fwdB; formylmethanofuran dehydrogenase subunit B rbh
S28_scaffold_2148_curated_10
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11067..11501
DNA (435bp) protein (145aa)
Formylmethanofuran dehydrogenase subunit A (EC:1.2.99.5)
Formylmethanofuran dehydrogenase subunit A n=2 Tax=Methanosarcina mazei RepID=M1PYI1_METMZ
Protein fwdA {ECO:0000313|EMBL:KKG15641.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
Displaying 11 items

View Taxonomy