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13_1_40cm_4_scaffold_12948

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12948_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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62..274
DNA (213bp) protein (71aa)
Ribosomal protein S28e n=1 Tax=mine drainage metagenome RepID=T1CGJ7_9ZZZZ
rps28e; 30S ribosomal protein S28e Tax=RBG_16_Euryarchaeota_68_12_curated
rps28e; 30S ribosomal protein S28e
13_1_40cm_4_scaffold_12948_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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342..893
DNA (552bp) protein (184aa)
ribosomal protein L24E Tax=RBG_16_Euryarchaeota_68_12_curated
LSU ribosomal protein l24e; K02896 large subunit ribosomal protein L24e
13_1_40cm_4_scaffold_12948_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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898..1353
DNA (456bp) protein (152aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_Euryarchaeota_68_12_curated
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY9_ARCPA
13_1_40cm_4_scaffold_12948_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1413..3173
DNA (1761bp) protein (587aa)
Probable translation initiation factor IF-2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDE8_ACIB4
translation initiation factor aIF-2; K03243 translation initiation factor 5B Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor aIF-2
13_1_40cm_4_scaffold_12948_5

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comp(3356..4234)
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM90931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_12948_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4325..5179
DNA (855bp) protein (285aa)
GCN5-related N-acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0A7_DYAFD
acyltransferase Tax=RBG_16_Euryarchaeota_68_12_curated
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_12948_7
unknown

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comp(5228..5590)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_4_scaffold_12948_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5680..6009
DNA (330bp) protein (110aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_12948_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6080..6775
DNA (696bp) protein (232aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_12_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_12948_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(6772..7872)
DNA (1101bp) protein (367aa)
Membrane metalloprotease n=1 Tax=mine drainage metagenome RepID=T1AYU3_9ZZZZ
putative membrane-associated Zn-dependent protease Tax=RBG_16_Euryarchaeota_68_12_curated
peptidase M50
13_1_40cm_4_scaffold_12948_11
unknown

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8009..8287
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_12948_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8158..8538)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D55A8
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_12948_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8646..9464)
DNA (819bp) protein (273aa)
MEMO1 family protein AciM339_1253 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM58_ACIS0
putative dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
putative dioxygenase
13_1_40cm_4_scaffold_12948_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(9474..10094)
DNA (621bp) protein (207aa)
30S ribosomal protein S2 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F358
rps2P; 30S ribosomal protein S2 Tax=RBG_16_Euryarchaeota_68_12_curated
rps2P; 30S ribosomal protein S2
13_1_40cm_4_scaffold_12948_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(10096..10347)
DNA (252bp) protein (84aa)
phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Euryarchaeota_68_12_curated
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEF9_METPE
Displaying 15 items

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