ggKbase home page

13_1_40cm_4_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_190_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1..624
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037B116A
ABC-type multidrug transport system, ATPase component Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC-type multidrug transport system, ATPase component
13_1_40cm_4_scaffold_190_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

628..2169
DNA (1542bp) protein (514aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_190_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2235..2993
DNA (759bp) protein (253aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Macrolide-specific ABC-type efflux carrier n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXT4_THERP
macrolide-specific ABC-type efflux carrier
13_1_40cm_4_scaffold_190_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3018..5921
DNA (2904bp) protein (968aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHP6_9CHLR
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_190_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5942..6130)
DNA (189bp) protein (63aa)
YHS domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_190_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6191..6820)
DNA (630bp) protein (210aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_190_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6869..8863)
DNA (1995bp) protein (665aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X696_STRPR
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_190_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8914..9957
DNA (1044bp) protein (348aa)
Putative dehydrogenase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL08_ACIS0
putative dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative dehydrogenase
13_1_40cm_4_scaffold_190_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9977..11287)
DNA (1311bp) protein (437aa)
NDP-sugar dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (EC:1.1.1.-)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003645391
13_1_40cm_4_scaffold_190_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11368..12429
DNA (1062bp) protein (354aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXR7_MAHA5
13_1_40cm_4_scaffold_190_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

12426..13358
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B7929
rhomboid family protein Tax=RBG_16_Euryarchaeota_67_27_curated
rhomboid family protein
13_1_40cm_4_scaffold_190_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13524..13847
DNA (324bp) protein (108aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_190_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13922..14533
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003809A85
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_190_14
unknown

Not on your lists

14647..15090
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_190_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

15115..15801
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F6032
pheromone shutdown -like protein (traB) Tax=RBG_16_Euryarchaeota_67_27_curated
pheromone shutdown -like protein (traB)
13_1_40cm_4_scaffold_190_16

Not on your lists

comp(15792..16253)
DNA (462bp) protein (154aa)
Putative uncharacterized protein id=5799997 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61328.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
phospholipid methyltransferase
13_1_40cm_4_scaffold_190_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16403..17683
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B4CD4
putative DNA primase, eukaryotic-type, small subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative DNA primase, eukaryotic-type, small subunit
13_1_40cm_4_scaffold_190_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17834..20002
DNA (2169bp) protein (723aa)
TPR-repeat protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZ14_METCG
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
TPR-repeat-containing protein
13_1_40cm_4_scaffold_190_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


19999..20229
DNA (231bp) protein (77aa)
50S ribosomal protein L18Ae n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAD6_ACIB4
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein L20A (L18A)
13_1_40cm_4_scaffold_190_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20226..20672
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003725F6E
prefoldin subunit alpha Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Prefoldin alpha subunit (GimC alpha subunit)
13_1_40cm_4_scaffold_190_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

20673..21605
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003623685
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RBG_16_Euryarchaeota_67_27_curated
signal recognition particle-docking protein FtsY
13_1_40cm_4_scaffold_190_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

21607..22695
DNA (1089bp) protein (363aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_190_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(22696..23352)
DNA (657bp) protein (219aa)
Glycosyl transferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK42_ACIS0
glycosyl transferase Tax=RBG_16_Euryarchaeota_67_27_curated
glycosyl transferase
13_1_40cm_4_scaffold_190_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23392..24174)
DNA (783bp) protein (261aa)
Glycosyl transferase family 2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA35_ACIB4
glycosyl transferase family 2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase family 2
13_1_40cm_4_scaffold_190_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

24273..25361
DNA (1089bp) protein (363aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360B956
UDP-N-acetylglucosamine 2-epimerase
13_1_40cm_4_scaffold_190_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

25366..26475
DNA (1110bp) protein (370aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N203_ANATU
13_1_40cm_4_scaffold_190_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

26477..27739
DNA (1263bp) protein (421aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIA4_RHOM4
group 1 glycosyl transferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
group 1 glycosyl transferase
13_1_40cm_4_scaffold_190_28
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

27736..28896
DNA (1161bp) protein (387aa)
Glycosyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQH8_9EURY
group 1 glycosyl transferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase, group 1
13_1_40cm_4_scaffold_190_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

28939..30063
DNA (1125bp) protein (375aa)
glycosyltransferase (EC:2.4.1.-) Tax=RBG_16_RIF_WS3X_71_46_curated
Glycosyltransferase n=3 Tax=Burkholderiales RepID=A9IG69_BORPD id=5223778 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase
13_1_40cm_4_scaffold_190_30
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

30153..30725
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HAN0_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EQA36506.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
glycosyl transferase family protein
Displaying items 1-30 of 32 in total

View Taxonomy