ggKbase home page

13_1_40cm_4_scaffold_2196

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2196_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(168..1085)
DNA (918bp) protein (306aa)
Sugar kinase, ribokinase family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T589_9EURY
Sugar kinase, ribokinase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sugar kinase, ribokinase family protein
13_1_40cm_4_scaffold_2196_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1082..1726)
DNA (645bp) protein (215aa)
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGI6_THEPS
13_1_40cm_4_scaffold_2196_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1758..2996)
DNA (1239bp) protein (413aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) Tax=RBG_16_Euryarchaeota_68_13_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003803334
13_1_40cm_4_scaffold_2196_4
unknown

Not on your lists

comp(3042..3506)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_2196_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3621..4919)
DNA (1299bp) protein (433aa)
napA; Na(+)/H(+) antiporter Tax=RBG_16_Euryarchaeota_67_27_curated
Sodium/hydrogen exchanger id=4611463 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
napA; Na(+)/H(+) antiporter
13_1_40cm_4_scaffold_2196_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5005..5826
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_2196_7
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

5885..6319
DNA (435bp) protein (145aa)
hypothetical protein id=14630225 bin=bin8_Chloro species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_2196_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6369..7445
DNA (1077bp) protein (359aa)
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB07_METEZ
13_1_40cm_4_scaffold_2196_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7463..8005)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein id=4757985 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_4_scaffold_2196_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8002..8463)
DNA (462bp) protein (154aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RBG_16_Euryarchaeota_67_27_curated
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N9U9_9EURY
peroxiredoxin
13_1_40cm_4_scaffold_2196_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8535..9389)
DNA (855bp) protein (285aa)
FAD dependent oxidoreductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q23_SOLUE
FAD dependent oxidoreductase Tax=RBG_16_Euryarchaeota_68_13_curated
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_2196_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10066..10383)
DNA (318bp) protein (106aa)
FAD dependent oxidoreductase Tax=RBG_16_Euryarchaeota_67_27_curated
FAD dependent oxidoreductase id=14631624 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
Displaying 12 items

View Taxonomy