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13_1_40cm_4_scaffold_3290

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3290_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..144)
DNA (144bp) protein (48aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3290_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(146..766)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQF0_METZD
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_3290_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(788..1576)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA54_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_3290_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1577..2467)
DNA (891bp) protein (297aa)
ATPase RecA-superfamily n=1 Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA55_9EURY
putative circadian clock protein KaiC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative circadian clock protein KaiC
13_1_40cm_4_scaffold_3290_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2594..3229)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372E0F1
putative RNA-binding protein of the translin family Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative RNA-binding protein of the translin family
13_1_40cm_4_scaffold_3290_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3270..4589)
DNA (1320bp) protein (440aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) Tax=RBG_16_Euryarchaeota_67_27_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBZ3_9EURY
13_1_40cm_4_scaffold_3290_7
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4850..4996)
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:CBW27286.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Haloba
hypothetical protein
13_1_40cm_4_scaffold_3290_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5046..5915)
DNA (870bp) protein (290aa)
Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9) Tax=RBG_16_Euryarchaeota_68_13_curated
Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CDF9E
13_1_40cm_4_scaffold_3290_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6085..6651
DNA (567bp) protein (189aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3290_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

6648..7799
DNA (1152bp) protein (384aa)
Digeranylgeranylglycerophospholipid reductase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I498_METCZ
dehydrogenase (flavoprotein) Tax=RBG_16_Euryarchaeota_67_27_curated
bchP; 2,3-di-O-geranylgeranylglyceryl phosphate reductase
13_1_40cm_4_scaffold_3290_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7858..8817
DNA (960bp) protein (320aa)
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037102BE
methylenetetrahydrofolate reductase
13_1_40cm_4_scaffold_3290_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

8886..10421
DNA (1536bp) protein (512aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4
IMP cyclohydrolase n=1 Tax=Desulfurispora thermophila RepID=UPI00038116D1
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
13_1_40cm_4_scaffold_3290_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10552..11076
DNA (525bp) protein (175aa)
purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Phosphoribosylglycinamide formyltransferase, folate-dependent n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A516_PELCD
purN; phosphoribosylglycinamide formyltransferase, folate-dependent
13_1_40cm_4_scaffold_3290_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11419..11973
DNA (555bp) protein (185aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GAF domain-containing protein
13_1_40cm_4_scaffold_3290_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11998..12546)
DNA (549bp) protein (183aa)
Transcriptional regulator, ArsR family n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN89_ARCVS
ArsR family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_3290_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12563..12838)
DNA (276bp) protein (92aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3290_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12887..13975)
DNA (1089bp) protein (363aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_3290_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14106..14327)
DNA (222bp) protein (74aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T8Q4_METSL
deoxyribonuclease/rho motif-related TRAM Tax=RBG_16_Euryarchaeota_68_13_curated
TRAM domain-containing protein
13_1_40cm_4_scaffold_3290_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14429..14887)
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_3290_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15056..15349)
DNA (294bp) protein (98aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_3290_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15454..16092)
DNA (639bp) protein (213aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_3290_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


16199..18403
DNA (2205bp) protein (735aa)
Methionine--tRNA ligase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP28_ACIS0
methionyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_67_27_curated
methionyl-tRNA synthetase
13_1_40cm_4_scaffold_3290_23
unknown

Not on your lists

comp(18431..18871)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_3290_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

19406..19657
DNA (252bp) protein (84aa)
putative metal-dependent phosphoesterase, PHP family Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_3290_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19654..20013)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360600D
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Roadblock/LC7 family protein; K07131
13_1_40cm_4_scaffold_3290_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(20091..20498)
DNA (408bp) protein (136aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Euryarchaeota RepID=M9SBQ9_9EURY
13_1_40cm_4_scaffold_3290_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(20944..21300)
DNA (357bp) protein (119aa)
nucleotidyltransferase n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003693A18
cytidyltransferase-related enzyme Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cytidyltransferase-related enzyme
13_1_40cm_4_scaffold_3290_28
unknown

Not on your lists

22196..22261
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 28 items

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