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13_1_40cm_4_scaffold_4381

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4381_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(33..1130)
DNA (1098bp) protein (366aa)
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RBG_16_Euryarchaeota_68_12_curated
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B18DA
13_1_40cm_4_scaffold_4381_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1123..3117)
DNA (1995bp) protein (665aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA topoisomerase VI subunit B (EC:5.99.1.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003735A5E
13_1_40cm_4_scaffold_4381_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(3243..3656)
DNA (414bp) protein (138aa)
VanZ family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4H4_SPHTD
VanZ family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
VanZ family protein
13_1_40cm_4_scaffold_4381_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3643..4650)
DNA (1008bp) protein (336aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4381_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4753..5688
DNA (936bp) protein (312aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH43_MOOTA
13_1_40cm_4_scaffold_4381_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5739..5939
DNA (201bp) protein (67aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_4381_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(5946..7541)
DNA (1596bp) protein (532aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6I2_SPHTD
oxidoreductase molybdopterin binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
oxidoreductase molybdopterin binding protein
13_1_40cm_4_scaffold_4381_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7592..7975
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
lyase
13_1_40cm_4_scaffold_4381_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8015..9118
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035EF944
small GTP-binding protein domain protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein domain protein
13_1_40cm_4_scaffold_4381_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(9137..10318)
DNA (1182bp) protein (394aa)
valS; valyl-tRNA ligase (EC:6.1.1.9) Tax=RBG_16_Euryarchaeota_68_12_curated
valS; valyl-tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D456_9ARCH
13_1_40cm_4_scaffold_4381_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10269..11423)
DNA (1155bp) protein (385aa)
valS; valyl-tRNA ligase (EC:6.1.1.9) Tax=RBG_16_Euryarchaeota_68_12_curated
Valyl-tRNA synthetase n=1 Tax=uncultured crenarchaeote RepID=H5SBA4_9CREN
Suspect SCG annotation. See neighboring gene [13_1_40cm_4_scaffold_4381_10].
valS; valyl-tRNA synthetase
13_1_40cm_4_scaffold_4381_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11564..12190
DNA (627bp) protein (209aa)
small GTP-binding protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036C8522
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_4381_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12683..12943)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JPM4_9THEM
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
Displaying 13 items

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