ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 10851-10900 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_378633 Species: Methanoculleus bourgensis (50%)	2	1085 bp	66.27	5.25	100.09
13_1_40cm_4_scaffold_177255 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2143 bp	65.28	46.03	100.09
13_1_40cm_4_scaffold_274675 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	2140 bp	65.70	30.47	100.09
13_1_40cm_4_scaffold_239634 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1061 bp	64.56	2.54	100.09
13_1_40cm_4_scaffold_123927 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2107 bp	65.92	7.69	100.10
13_1_40cm_4_scaffold_242849 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1049 bp	57.29	1.72	100.10
13_1_40cm_4_scaffold_66168 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2095 bp	64.34	2.94	100.10
13_1_40cm_4_scaffold_66203 Species: RBG_16_Euryarchaeota_62_10_curated (50%)	2	2095 bp	59.38	14.18	100.10
13_1_40cm_4_scaffold_66588 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	2089 bp	64.05	11.70	100.10
13_1_40cm_4_scaffold_245254 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1040 bp	65.58	3.75	100.10
13_1_40cm_4_scaffold_246177 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1037 bp	60.56	43.25	100.10
13_1_40cm_4_scaffold_111804 Species: Methanocella conradii (50%)	2	2065 bp	65.23	2.69	100.10
13_1_40cm_4_scaffold_84491 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	3084 bp	64.72	14.14	100.10
13_1_40cm_4_scaffold_195003 Species: RBG_16_Euryarchaeota_62_10_curated (50%)	2	2056 bp	69.80	6.20	100.10
13_1_40cm_4_scaffold_253209 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1013 bp	64.26	1.48	100.10
13_1_40cm_4_scaffold_256744 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1001 bp	64.74	10.04	100.10
13_1_40cm_4_scaffold_217570 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1900 bp	69.53	3.95	100.11
13_1_40cm_4_scaffold_81527 Species: Methanosarcina mazei (50%)	2	1891 bp	61.29	2.30	100.11
13_1_40cm_4_scaffold_320295 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1735 bp	68.59	18.33	100.12
13_1_40cm_4_scaffold_97476 Species: Methanomethylovorans hollandica (50%)	2	1729 bp	57.37	3.21	100.12
13_1_40cm_4_scaffold_99615 Species: Thermoplasmatales archaeon Gpl (100%)	2	1711 bp	49.80	1.58	100.12
13_1_40cm_4_scaffold_102085 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1690 bp	65.92	23.52	100.12
13_1_40cm_4_scaffold_109569 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1633 bp	73.42	86.34	100.12
13_1_40cm_4_scaffold_50466 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	3233 bp	64.49	17.66	100.12
13_1_40cm_4_scaffold_261006 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1594 bp	65.37	3.11	100.13
13_1_40cm_4_scaffold_115551 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1591 bp	64.05	3.68	100.13
13_1_40cm_4_scaffold_224333 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1585 bp	66.88	66.76	100.13
13_1_40cm_4_scaffold_229901 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1576 bp	64.78	42.40	100.13
13_1_40cm_4_scaffold_88374 Phylum: Euryarchaeota (50%)	4	2337 bp	65.34	3.02	100.13
13_1_40cm_4_scaffold_120722 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1558 bp	62.52	8.18	100.13
13_1_40cm_4_scaffold_240505 Species: Candidatus Halobonum tyrrellensis (50%)	2	1537 bp	51.20	1.95	100.13
13_1_40cm_4_scaffold_66337 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	3050 bp	67.08	55.78	100.13
13_1_40cm_4_scaffold_19001 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	4	3784 bp	67.07	17.36	100.13
13_1_40cm_4_scaffold_186000 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	2268 bp	61.33	9.28	100.13
13_1_40cm_4_scaffold_132785 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1486 bp	64.00	3.43	100.13
13_1_40cm_4_scaffold_508363 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1483 bp	65.88	4.96	100.13
13_1_40cm_4_scaffold_134942 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1474 bp	72.52	2.14	100.14
13_1_40cm_4_scaffold_34633 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	3610 bp	67.09	7.15	100.14
13_1_40cm_4_scaffold_236875 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2157 bp	64.26	20.58	100.14
13_1_40cm_4_scaffold_62824 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2151 bp	71.13	12.97	100.14
13_1_40cm_4_scaffold_40904 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2852 bp	66.87	4.44	100.14
13_1_40cm_4_scaffold_233918 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2139 bp	64.47	4.53	100.14
13_1_40cm_4_scaffold_104663 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	2100 bp	62.90	6.11	100.14
13_1_40cm_4_scaffold_151274 Species: Methanoregula boonei (100%)	2	1390 bp	52.66	2.59	100.14
13_1_40cm_4_scaffold_151294 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1390 bp	66.62	17.37	100.14
13_1_40cm_4_scaffold_314719 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1357 bp	70.30	3.43	100.15
13_1_40cm_4_scaffold_160053 Species: Natronolimnobius innermongolicus (50%)	2	1351 bp	63.88	2.89	100.15
13_1_40cm_4_scaffold_161473 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1345 bp	64.16	4.91	100.15
13_1_40cm_4_scaffold_330102 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1333 bp	67.74	45.15	100.15
13_1_40cm_4_scaffold_167089 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1321 bp	65.71	2.38	100.15

Displaying items 10851-10900 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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