ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 10901-10950 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_167739 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1318 bp	66.31	7.97	100.15
13_1_40cm_4_scaffold_168601 Species: Natrinema sp. J7-2 (50%)	2	1315 bp	68.29	3.76	100.15
13_1_40cm_4_scaffold_337292 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1965 bp	62.70	3.09	100.15
13_1_40cm_4_scaffold_173086 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1297 bp	63.84	2.78	100.15
13_1_40cm_4_scaffold_173088 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1297 bp	71.09	13.53	100.15
13_1_40cm_4_scaffold_263010 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1908 bp	64.26	24.76	100.16
13_1_40cm_4_scaffold_369366 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1270 bp	65.91	42.17	100.16
13_1_40cm_4_scaffold_184196 Species: Methanoculleus bourgensis (50%)	2	1255 bp	59.20	2.75	100.16
13_1_40cm_4_scaffold_184206 Species: Methanocella conradii (50%)	2	1255 bp	62.15	1.20	100.16
13_1_40cm_4_scaffold_343311 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1255 bp	66.85	7.77	100.16
13_1_40cm_4_scaffold_185030 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1252 bp	64.94	1.80	100.16
13_1_40cm_4_scaffold_390995 Species: Methanocaldococcus villosus (50%)	2	1249 bp	51.00	4.44	100.16
13_1_40cm_4_scaffold_187442 Species: Methanosarcina sp. MTP4 (50%)	2	1243 bp	45.78	1.69	100.16
13_1_40cm_4_scaffold_85866 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1842 bp	65.91	23.70	100.16
13_1_40cm_4_scaffold_220085 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1830 bp	66.34	13.11	100.16
13_1_40cm_4_scaffold_146040 Species: Halobiforma nitratireducens (50%)	2	2438 bp	69.65	1.97	100.16
13_1_40cm_4_scaffold_194530 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1219 bp	55.13	8.00	100.16
13_1_40cm_4_scaffold_194541 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1219 bp	65.38	1.23	100.16
13_1_40cm_4_scaffold_195463 Species: Methanococcoides burtonii (50%)	2	1216 bp	67.60	13.57	100.16
13_1_40cm_4_scaffold_319845 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1213 bp	63.40	15.46	100.16
13_1_40cm_4_scaffold_196257 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1213 bp	68.51	43.40	100.16
13_1_40cm_4_scaffold_196279 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1213 bp	68.34	4.20	100.16
13_1_40cm_4_scaffold_362157 Species: Natrialba taiwanensis (50%)	2	1186 bp	69.39	3.79	100.17
13_1_40cm_4_scaffold_457693 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1171 bp	66.78	2.47	100.17
13_1_40cm_4_scaffold_94949 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1752 bp	64.27	51.37	100.17
13_1_40cm_4_scaffold_210498 Species: Halogranum salarium (50%)	2	1165 bp	68.76	2.96	100.17
13_1_40cm_4_scaffold_213748 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1153 bp	65.48	3.12	100.17
13_1_40cm_4_scaffold_389020 Phylum: Euryarchaeota (100%)	3	1153 bp	68.00	3.51	100.17
13_1_40cm_4_scaffold_152861 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2291 bp	67.18	3.80	100.18
13_1_40cm_4_scaffold_450098 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	1144 bp	66.43	2.62	100.18
13_1_40cm_4_scaffold_100792 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1701 bp	50.09	2.29	100.18
13_1_40cm_4_scaffold_494172 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1126 bp	68.29	4.00	100.18
13_1_40cm_4_scaffold_222339 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1123 bp	67.41	2.14	100.18
13_1_40cm_4_scaffold_410881 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1680 bp	64.64	9.52	100.18
13_1_40cm_4_scaffold_222817 Species: Halosimplex carlsbadense (50%)	2	1668 bp	72.60	2.34	100.18
13_1_40cm_4_scaffold_226597 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1108 bp	67.51	12.73	100.18
13_1_40cm_4_scaffold_229917 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1096 bp	65.51	12.59	100.18
13_1_40cm_4_scaffold_108053 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1644 bp	66.85	8.03	100.18
13_1_40cm_4_scaffold_108495 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1641 bp	61.12	4.66	100.18
13_1_40cm_4_scaffold_108809 Species: Methanoregula formicica (50%)	2	1638 bp	65.93	2.38	100.18
13_1_40cm_4_scaffold_231648 Species: BJP_IG2102_Methanoregula_52_95 (50%)	2	1090 bp	54.22	2.61	100.18
13_1_40cm_4_scaffold_484419 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1090 bp	65.32	47.79	100.18
13_1_40cm_4_scaffold_231505 Species: Methanococcoides methylutens (50%)	2	1090 bp	61.47	8.39	100.18
13_1_40cm_4_scaffold_232458 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1087 bp	66.24	3.59	100.18
13_1_40cm_4_scaffold_61947 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2165 bp	63.65	12.19	100.18
13_1_40cm_4_scaffold_128914 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	2159 bp	63.59	5.91	100.18
13_1_40cm_4_scaffold_111795 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1617 bp	62.96	12.80	100.19
13_1_40cm_4_scaffold_256919 Species: RBG_16_Euryarchaeota_68_13_curated (60%)	5	2153 bp	65.63	3.97	100.19
13_1_40cm_4_scaffold_415624 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1072 bp	63.99	22.53	100.19
13_1_40cm_4_scaffold_113416 Phylum: Euryarchaeota (66.67%)	3	1605 bp	57.63	2.24	100.19

Displaying items 10901-10950 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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