ggKbase home page

13_1_40cm_3_scaffold_31148

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_31148_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2..343
DNA (342bp) protein (114aa)
DNA repair helicase rad3; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_16_Euryarchaeota_67_27_curated
DEAD_2 domain protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] id=5043688 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_31148_2
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(291..779)
DNA (489bp) protein (163aa)
Sortase-like acyltransferase n=2 Tax=Singulisphaera acidiphila RepID=L0DLN4_SINAD
sortase Tax=CG_Anaero_03
sortase
13_1_40cm_3_scaffold_31148_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

839..1450
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
O-sialoglycoprotein endopeptidase Tax=RBG_16_Euryarchaeota_67_27_curated
p53-regulating protein kinase
13_1_40cm_3_scaffold_31148_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


1447..2004
DNA (558bp) protein (186aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFN2_PYRYC
deoxyribonucleotide triphosphate pyrophosphatase
13_1_40cm_3_scaffold_31148_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2039..3007
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
nucleoside-diphosphate-sugar epimerase
13_1_40cm_3_scaffold_31148_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3232..3588
DNA (357bp) protein (119aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein Bm3-1_04649 id=4449776 bin=GWC2_Chloroflexi_73_18 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_31148_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3591..4277)
DNA (687bp) protein (229aa)
Predicted ATPase of the PP-loop superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXL8_METKA
hypothetical protein; K06927 Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical protein
13_1_40cm_3_scaffold_31148_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4411..5103
DNA (693bp) protein (231aa)
Creatininase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEI1_ACIB4
creatininase Tax=RBG_16_Euryarchaeota_68_12_curated
Creatininase
13_1_40cm_3_scaffold_31148_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5105..5797
DNA (693bp) protein (231aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=2 Tax=Bradyrhizobiaceae RepID=F7QLK3_9BRAD
13_1_40cm_3_scaffold_31148_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5781..5936)
DNA (156bp) protein (52aa)
Transcriptional regulator, TrmB n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5S4_9EURY
transcriptional regulator, TrmB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcriptional regulator, TrmB
Displaying 10 items

View Taxonomy