ggKbase home page

13_1_40cm_3_scaffold_47026

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_47026_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(137..1030)
DNA (894bp) protein (298aa)
ABC-type transport system permease protein (Probable substrate glutamine/glutamate/polar amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA6_NATPD
putative glutamine ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
amino acid ABC transporter membrane protein, PAAT family
13_1_40cm_3_scaffold_47026_2
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1034..1174)
DNA (141bp) protein (47aa)
ABC transporter related n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AX53_RHILS
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGR80028.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manga
ABC transporter
13_1_40cm_3_scaffold_47026_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1141..1683)
DNA (543bp) protein (181aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RBG_16_Euryarchaeota_68_13_curated
ABC transporter n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B75830
ABC transporter
13_1_40cm_3_scaffold_47026_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1680..2591)
DNA (912bp) protein (304aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Thermotoga sp. EMP RepID=J9HEZ4_9THEM
glutamine ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
polar amino acid ABC transporter, inner membrane subunit
13_1_40cm_3_scaffold_47026_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2666..3535)
DNA (870bp) protein (290aa)
Extracellular solute-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SMH0_9BACT
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ABC-type transporter, periplasmic subunit family 3
13_1_40cm_3_scaffold_47026_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3623..3886)
DNA (264bp) protein (88aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Euryarchaeota_67_27_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=mine drainage metagenome RepID=T0YAP9_9ZZZZ
13_1_40cm_3_scaffold_47026_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3955..4848)
DNA (894bp) protein (298aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003755AF3
13_1_40cm_3_scaffold_47026_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4936..5082)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0A1_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_3_scaffold_47026_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5220..5624
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2Q2_9ARCH
hypothetical protein
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_47026_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5730..6128
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S023_THEPD
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_47026_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6692..7339)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE57796.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
13_1_40cm_3_scaffold_47026_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


7503..8090
DNA (588bp) protein (196aa)
30S ribosomal protein S2 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F358
rps2P; 30S ribosomal protein S2 Tax=RBG_16_Euryarchaeota_67_27_curated
rps2P; 30S ribosomal protein S2
13_1_40cm_3_scaffold_47026_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8103..8966
DNA (864bp) protein (288aa)
MEMO1 family protein AciM339_1253 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM58_ACIS0
putative dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
putative dioxygenase
13_1_40cm_3_scaffold_47026_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8957..9262)
DNA (306bp) protein (102aa)
CutA1 divalent ion tolerance protein n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VHC7_9CREN
divalent-cation tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CutA1 divalent ion tolerance protein
13_1_40cm_3_scaffold_47026_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9331..9597
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D55A8
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
Displaying 15 items

View Taxonomy