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13_1_40cm_3_scaffold_4281

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4281_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3..461
DNA (459bp) protein (153aa)
Flap endonuclease 1 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REH6_ARCPA
flap structure-specific endonuclease Tax=RBG_16_Euryarchaeota_68_13_curated
XPG I domain-containing protein
13_1_40cm_3_scaffold_4281_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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556..2301
DNA (1746bp) protein (582aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Bacterial extracellular solute-binding protein, family 5 Middle
13_1_40cm_3_scaffold_4281_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2381..3412
DNA (1032bp) protein (344aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K9G9_THENN
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
Binding-protein-dependent transport systems inner membrane component
13_1_40cm_3_scaffold_4281_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3417..4775
DNA (1359bp) protein (453aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
binding-protein-dependent transport systems inner membrane component
13_1_40cm_3_scaffold_4281_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4775..5737
DNA (963bp) protein (321aa)
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
oppD; oligopeptide ABC transporter ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_4281_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5734..7026
DNA (1293bp) protein (431aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037015C7
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
cell wall oligopeptide ABC transporter (ATP binding protein)
13_1_40cm_3_scaffold_4281_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7116..7826
DNA (711bp) protein (237aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_4281_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8021..8908
DNA (888bp) protein (296aa)
Uncharacterized transporter AF_0266 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y266_ARCFU
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Permease of the drug/metabolite transporter (DMT) superfamily
13_1_40cm_3_scaffold_4281_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(8923..9336)
DNA (414bp) protein (138aa)
Nudix 7..137 Tax=RBG_16_Chloroflexi_54_18_curated
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_3_scaffold_4281_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9410..9739)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZTS4_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_67_27_curated
RecA-superfamily ATPase possibly involved in signal transduction
Displaying 10 items

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