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13_1_40cm_scaffold_2200

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2200_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2..1231
DNA (1230bp) protein (410aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_2200_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1292..2332
DNA (1041bp) protein (347aa)
Flap endonuclease 1 n=1 Tax=Thermofilum sp. 1910b RepID=S5ZDD3_9CREN
flap structure-specific endonuclease Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_scaffold_2200_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2451..4166
DNA (1716bp) protein (572aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Bacterial extracellular solute-binding protein, family 5 Middle
13_1_40cm_scaffold_2200_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4239..5270
DNA (1032bp) protein (344aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=D4TIZ2_9NOST
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
binding-protein-dependent transporter inner membrane component
13_1_40cm_scaffold_2200_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5383..6630
DNA (1248bp) protein (416aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_2200_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6630..7589
DNA (960bp) protein (320aa)
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oppD; oligopeptide ABC transporter ATP-binding protein
13_1_40cm_scaffold_2200_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7562..8881
DNA (1320bp) protein (440aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K2L4_STREN
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATPase
Displaying 7 items

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