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gwa2_scaffold_485

Alias: GW2011_AR4_6

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_485_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)
Tax=AR4
gwa2_scaffold_485_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(212..805)
DNA (594bp) protein (198aa)
Tax=AR4
gwa2_scaffold_485_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(816..2831)
DNA (2016bp) protein (672aa)
hppA; pyrophosphate-energized proton pump protein (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=AR4
hppA; Pyrophosphate-energized proton pump (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Membrane-bound proton-translocating pyrophosphatase) (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Caloramator australicus RC3 RepID=I7J4T1_9CLOT
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwa2_scaffold_485_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2942..3541)
DNA (600bp) protein (200aa)
Tax=AR4
gwa2_scaffold_485_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3688..3834)
DNA (147bp) protein (49aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwa2_scaffold_485_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3831..4940)
DNA (1110bp) protein (370aa)
Radical SAM domain protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UAJ0_CYAP2
tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein Tax=AR4
tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=25 to=310 evalue=2.3e-20)
gwa2_scaffold_485_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5055..6032
DNA (978bp) protein (326aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=AR4
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
HTHASNC (db=FPrintScan db_id=PR00033 from=2 to=18 evalue=2.6e-09 interpro_id=IPR000485 interpro_description=Transcription regulator HTH, AsnC-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
gwa2_scaffold_485_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6329..6667
DNA (339bp) protein (113aa)
Tax=AR4
gwa2_scaffold_485_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6716..8092)
DNA (1377bp) protein (459aa)
Sodium/hydrogen exchanger n=1 Tax=Beggiatoa sp. PS RepID=A7BR45_9GAMM
sodium/hydrogen exchanger Tax=AR4
sodium/hydrogen exchanger
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
gwa2_scaffold_485_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8203..9639
DNA (1437bp) protein (479aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio fructosovorans JJ RepID=E1JT35_DESFR
radical SAM family protein Tax=AR4
hpnJ; radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
seg (db=Seg db_id=seg from=90 to=99)
gwa2_scaffold_485_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9665..10129)
DNA (465bp) protein (155aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=22 to=37)
gwa2_scaffold_485_12
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10132..10719)
DNA (588bp) protein (196aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
coiled-coil (db=Coil db_id=coil from=18 to=53 evalue=NA)
seg (db=Seg db_id=seg from=29 to=42)
gwa2_scaffold_485_13

Not on your lists

comp(10786..11592)
DNA (807bp) protein (269aa)
Aldo/keto reductase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DP00_HALPG
Aldo/keto reductase {ECO:0000313|EMBL:KHO46857.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
aldo/keto reductase
ALDOKETO_REDUCTASE_2 (db=PatternScan db_id=PS00062 from=119 to=136 evalue=0.0 interpro_id=IPR018170 interpro_description=Aldo/keto reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
gwa2_scaffold_485_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11701..12135
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DYE8_9BACL
putative hydrolase Tax=AR4
putative hydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=41 to=62 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_485_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12181..12939)
DNA (759bp) protein (253aa)
Transcriptional regulator TrmB n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV83_9EURY
transcriptional regulator TrmB Tax=AR4
transcriptional regulator TrmB
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=6 to=102 evalue=0.00061 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
gwa2_scaffold_485_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

13059..13664
DNA (606bp) protein (202aa)
HAD-like domain Tax=AR4
HAD-like (db=superfamily db_id=SSF56784 from=1 to=168 evalue=1.6e-06 interpro_id=IPR023214 interpro_description=HAD-like domain)
gwa2_scaffold_485_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

13749..15089
DNA (1341bp) protein (447aa)
pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=AR4
pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein (EC:2.7.9.2)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QD50_9EURY
PEP_ENZYMES_PHOS_SITE (db=PatternScan db_id=PS00370 from=400 to=411 evalue=0.0 interpro_id=IPR018274 interpro_description=PEP-utilising enzyme, active site GO=Biological Process: phosphorylation (GO:0016310), Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
gwa2_scaffold_485_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

15562..16341
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDB3_9EURY
hypothetical protein Tax=AR4
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwa2_scaffold_485_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

16353..16808
DNA (456bp) protein (152aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
seg (db=Seg db_id=seg from=34 to=47)
gwa2_scaffold_485_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

16805..17641
DNA (837bp) protein (279aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] Tax=AR4
Signal peptide peptidase SppA n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFN8_9FIRM
signal peptide peptidase SppA, 36K type
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_485_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

17638..18465
DNA (828bp) protein (276aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] Tax=AR4
Signal peptide peptidase SppA, 36K type n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H6M6_DENA2
signal peptide peptidase SppA, 36K type
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_485_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(18619..19881)
DNA (1263bp) protein (421aa)
Translation initiation factor IF-2 subunit gamma n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQF3_9EURY
translation initiation factor 2 subunit gamma; K03242 translation initiation factor 2 subunit 3 Tax=AR4
Translation initiation factor 2 subunit gamma
(db=HMMPfam db_id=PF03144 from=240 to=305 evalue=1.2e-05 interpro_id=IPR004161 interpro_description=Translation elongation factor EFTu/EF1A, domain 2 GO=Molecular Function: GTP binding (GO:0005525))
gwa2_scaffold_485_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(19882..20406)
DNA (525bp) protein (175aa)
30S ribosomal protein S6e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI14_ARCPA
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=AR4
30S ribosomal protein S6e
RIBOSOMAL_S6E (db=PatternScan db_id=PS00578 from=52 to=63 evalue=0.0 interpro_id=IPR018282 interpro_description=Ribosomal protein S6e, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_485_24

Not on your lists


comp(20494..21183)
DNA (690bp) protein (230aa)
Diphthamide biosynthesis protein 2-related domain protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YK01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO46868.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
diphthamide biosynthesis protein 2-related domain protein
(db=HMMPfam db_id=PF01866 from=2 to=215 evalue=4.0e-45 interpro_id=IPR002728 interpro_description=Diphthamide synthesis, DPH1/DHP2 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: peptidyl-diphthamide biosynthetic process from peptidyl-histidine (GO:0017183))
gwa2_scaffold_485_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21207..21980)
DNA (774bp) protein (258aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=96 to=110)
gwa2_scaffold_485_26
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

22131..23015
DNA (885bp) protein (295aa)
coiled-coil Tax=AR4
coiled-coil (db=Coil db_id=coil from=217 to=238 evalue=NA)
gwa2_scaffold_485_27
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23292..23621
DNA (330bp) protein (110aa)
V-type ATP synthase subunit G (EC:3.6.3.14)
ATP synthase H subunit n=8 Tax=Halorubrum RepID=M0DRM6_9EURY
ATP synthase H subunit Tax=AR4
coiled-coil (db=Coil db_id=coil from=1 to=33 evalue=NA)
gwa2_scaffold_485_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23605..25434
DNA (1830bp) protein (610aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=AR4
V-type ATP synthase subunit I n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFK9_9EURY
V-type ATP synthase subunit I
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
gwa2_scaffold_485_29
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

25449..25694
DNA (246bp) protein (82aa)
A1AO H+ ATPase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] Tax=AR4
H+transporting two-sector ATPase C subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MSI1_9EURY
H+transporting two-sector ATPase C subunit
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_485_30
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

25719..26264
DNA (546bp) protein (182aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] Tax=AR4
V-type proton ATPase subunit E n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP29_METZD
H+transporting two-sector ATPase E subunit
seg (db=Seg db_id=seg from=3 to=17)
Displaying items 1-30 of 68 in total

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