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13_1_40cm_scaffold_858

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_858_1
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..142
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZC7_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV64256.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (st
13_1_40cm_scaffold_858_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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355..585
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56985.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_858_3
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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975..1409
DNA (435bp) protein (145aa)
msrA; Peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000313|EMBL:AJM92365.1}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EPJ3_9ARCH
13_1_40cm_scaffold_858_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1646..2218)
DNA (573bp) protein (191aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15200.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_scaffold_858_5
unknown

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comp(2424..2642)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_858_6
unknown

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comp(4623..4826)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_858_7
unknown

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5162..5518
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_858_8
unknown

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comp(5795..6229)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_scaffold_858_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7178..8278
DNA (1101bp) protein (367aa)
Putative GTP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDU6_NITGG
GTP-binding protein
Putative GTP-binding protein {ECO:0000313|EMBL:AFU56988.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_scaffold_858_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9844..11184
DNA (1341bp) protein (447aa)
aspS1; aspartate--tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase {ECO:0000313|EMBL:AFU57221.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AFU57221.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
Aspartate--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K0_NITGG
13_1_40cm_scaffold_858_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11221..11493
DNA (273bp) protein (91aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA amidotransferase subunit C {ECO:0000313|EMBL:AFU57220.1}; EC=6.3.5.- {ECO:0000313|EMBL:AFU57220.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrosospha
Aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD9_NITGG
13_1_40cm_scaffold_858_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11381..12664)
DNA (1284bp) protein (428aa)
Transcription termination factor NusA n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFH9_CHLTF
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
transcription termination factor NusA
13_1_40cm_scaffold_858_13
unknown

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comp(12688..12804)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 13 items

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