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14_0903_02_40cm_scaffold_938

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_02_40cm_scaffold_938_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..1499)
DNA (1497bp) protein (499aa)
Preprotein translocase, SecY subunit n=1 Tax=mine drainage metagenome RepID=T1A470_9ZZZZ
preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_2

Not on your lists


comp(1503..1940)
DNA (438bp) protein (146aa)
50S ribosomal protein L15P n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362CADA
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L27Ae (L15p)
14_0903_02_40cm_scaffold_938_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(1930..2418)
DNA (489bp) protein (163aa)
50S ribosomal protein L30P n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FIS1_9EURY
ribosomal protein L30P; K02907 large subunit ribosomal protein L30
Tax=RBG_16_Euryarchaeota_68_13_curated
14_0903_02_40cm_scaffold_938_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(2415..3251)
DNA (837bp) protein (279aa)
30S ribosomal protein S5 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5J5_9EURY rbh
rps5p; 30S ribosomal protein S5P rbh
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_5

Not on your lists


comp(3251..4225)
DNA (975bp) protein (325aa)
50S ribosomal protein L18 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
14_0903_02_40cm_scaffold_938_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4222..4995)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377A3F2
ribosomal protein L32e; K02912 large subunit ribosomal protein L32e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_7

Not on your lists


comp(4998..5546)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S6E9_METSF
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
14_0903_02_40cm_scaffold_938_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(5555..5944)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
rps8p; 30S ribosomal protein S8P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_9

Not on your lists


comp(6097..6606)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372A27B
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L11e (L5p)
14_0903_02_40cm_scaffold_938_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6615..7325)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630352
ribosomal protein S4E, central domain protein; K02987 small subunit ribosomal protein S4e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(7322..7690)
DNA (369bp) protein (123aa)
50S ribosomal protein L24P n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL24_AERPE
rpl24p; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0903_02_40cm_scaffold_938_12

Not on your lists


comp(7701..8099)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
14_0903_02_40cm_scaffold_938_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(8096..8488)
DNA (393bp) protein (131aa)
30S ribosomal protein S17 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369E0
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8495..8746)
DNA (252bp) protein (84aa)
ribonuclease P subunit P29 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T1N1_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
14_0903_02_40cm_scaffold_938_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8747..8962)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000378FEBB
ribosomal protein L29
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0903_02_40cm_scaffold_938_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(8995..9885)
DNA (891bp) protein (297aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I7_9EURY
rps3p; 30S ribosomal protein S3P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_17

Not on your lists


comp(9886..10341)
DNA (456bp) protein (152aa)
50S ribosomal protein L22 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366A406
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
14_0903_02_40cm_scaffold_938_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(10350..10814)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037DD1D8
SSU ribosomal protein S15e (S19p)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_0903_02_40cm_scaffold_938_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(10820..11533)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381615B
ribosomal protein L2; K02886 large subunit ribosomal protein L2
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0903_02_40cm_scaffold_938_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(11533..11814)
DNA (282bp) protein (94aa)
50S ribosomal protein L23P n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMI9_9EURY
Ribosomal protein L23
Tax=RBG_16_Euryarchaeota_67_27_curated
14_0903_02_40cm_scaffold_938_21

Not on your lists


comp(11811..12230)
DNA (420bp) protein (140aa)
50S ribosomal protein L4 n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=RL4_THEAC
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS13122.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4; K02930 large subunit ribosomal protein L4e
14_0903_02_40cm_scaffold_938_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(12227..12739)
DNA (513bp) protein (171aa)
50S ribosomal protein L4P (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YDF9_9ZZZZ
LSU ribosomal protein L1e (L4p)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(12745..13716)
DNA (972bp) protein (324aa)
50S ribosomal protein L3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8W8_9EURY
rpl3p; 50S ribosomal protein L3P
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_0903_02_40cm_scaffold_938_24
unknown

Not on your lists

comp(13968..14132)
DNA (165bp) protein (55aa)

This feature has no annotations

14_0903_02_40cm_scaffold_938_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14315..14863
DNA (549bp) protein (183aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 25 items

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