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Ig5181_scaffold_39232

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_39232_1
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..368)
DNA (366bp) protein (122aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycyl-tRNA synthetase alpha chain Tax=Smithella sp. ME-1 RepID=V4GTA6_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

664..1821
DNA (1158bp) protein (386aa)
Alcohol dehydrogenase yqhD Tax=Yersinia mollaretii ATCC 43969 RepID=C4SBU1_YERMO
yqhD; alcohol dehydrogenase YqhD
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_3

Not on your lists

1876..2121
DNA (246bp) protein (82aa)
sfu:Sfum_2433 sodium/hydrogen exchanger bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Uncharacterized protein {ECO:0000313|EMBL:EKD26543.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sodium/hydrogen exchanger
Ig5181_scaffold_39232_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2595..3143
DNA (549bp) protein (183aa)
porin Tax=Pseudomonas thermotolerans RepID=UPI000382BC51
oprF2; outer membrane porin F
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_5
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3218..4432)
DNA (1215bp) protein (405aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN38274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
Peptidase, U32 family bin=GWF2_OP9-related_38_17 species=Filifactor alocis genus=Filifactor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
peptidase U32
Ig5181_scaffold_39232_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4445..5218)
DNA (774bp) protein (258aa)
DNA repair protein RecO Tax=Syntrophus aciditrophicus (strain SB) RepID=RECO_SYNAS
DNA repair protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5221..6504)
DNA (1284bp) protein (428aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6501..7430)
DNA (930bp) protein (310aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_9
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7553..8101)
DNA (549bp) protein (183aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
Bifunctional protein PyrR bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Ig5181_scaffold_39232_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8520..9191)
DNA (672bp) protein (224aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9207..9719)
DNA (513bp) protein (171aa)
Hypothetical membrane protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH2_SYNAS
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_12
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..10635)
DNA (915bp) protein (305aa)
Protein translocase subunit SecF bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
secF; preprotein translocase subunit SecF
Tax=BJP_08E140C01_Syntrophobacterales_43_19
Ig5181_scaffold_39232_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10663..12264)
DNA (1602bp) protein (534aa)
Protein translocase subunit SecD Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH4_SYNAS
protein translocase subunit
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_14
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12283..12513)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN38265.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
Protein translocase subunit bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
protein translocase subunit
Ig5181_scaffold_39232_15
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12513..12617)
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN38265.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
Ig5181_scaffold_39232_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12692..13792)
DNA (1101bp) protein (367aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_17
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13802..14842)
DNA (1041bp) protein (347aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_18
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14915..15100)
DNA (186bp) protein (62aa)
Hypothetical membrane protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15105..15905)
DNA (801bp) protein (267aa)
MazG-like domain protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVG8_SYNAS
nucleotide pyrophosphohydrolase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15902..17212)
DNA (1311bp) protein (437aa)
Histone deacetylase domain protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUP3_SYNAS
histone deacetylase domain-containing protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_21
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17217..18878)
DNA (1662bp) protein (554aa)
Hydantoinase/oxoprolinase family Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUP4_SYNAS
hydantoinase/oxoprolinase family protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_22
unknown

Not on your lists

comp(19111..19338)
DNA (228bp) protein (76aa)

This feature has no annotations

Ig5181_scaffold_39232_23
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19419..19802
DNA (384bp) protein (128aa)
Hypothetical membrane protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_24
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19868..20263
DNA (396bp) protein (132aa)
Hypothetical membrane protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_25
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20270..20731
DNA (462bp) protein (154aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUN7_SYNAS
cytoplasmic protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_26
unknown

Not on your lists

20758..20970
DNA (213bp) protein (71aa)

This feature has no annotations

Ig5181_scaffold_39232_27
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21096..21296)
DNA (201bp) protein (67aa)
Cytoplasmic protein {ECO:0000313|EMBL:KFN38255.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
Hypothetical cytosolic protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Ig5181_scaffold_39232_28
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21293..22192)
DNA (900bp) protein (300aa)
nadE; NAD synthetase (EC:6.3.1.5)
Glutamine-dependent NAD(+) synthetase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUN9_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_39232_29
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22176..23288)
DNA (1113bp) protein (371aa)
NAD synthetase {ECO:0000313|EMBL:KFN38252.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KFN38252.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
nadE; NAD synthetase (EC:6.3.1.5)
Glutamine-dependent NAD(+) synthetase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUN9_SYNAS
Ig5181_scaffold_39232_30
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23293..24060)
DNA (768bp) protein (256aa)
GTP cyclohydrolase folE2 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying items 1-30 of 49 in total

View Taxonomy