ggKbase home page

Ig5181_scaffold_120813

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_120813_1
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
Glycoside hydrolase, family 1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BBD0_BURCM
glycoside hydrolase
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ACB65326.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;"
Ig5181_scaffold_120813_2
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428..1405)
DNA (978bp) protein (326aa)
Zn-dependent hydrolase, glyoxylase Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7INJ4_DESMD
Beta-lactamase {ECO:0000313|EMBL:KFO68848.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
Zn-dependent hydrolase
Ig5181_scaffold_120813_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1469..3355)
DNA (1887bp) protein (629aa)
ribonuclease E (EC:3.1.4.-)
Ribonuclease E bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3451..4056)
DNA (606bp) protein (202aa)
Sua5/YciO/YrdC/YwlC family protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LU49_SYNAS
Sua5/YciO/YrdC/YwlC family protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4159..5736)
DNA (1578bp) protein (526aa)
alpha-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6101..8089
DNA (1989bp) protein (663aa)
ial:IALB_0296 Kef-type K+ transport system membrane subunit; K03455 monovalent cation:H+ antiporter-2, CPA2 family bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Kef-type K+ transport system membrane subunit
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_7
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8067..9011
DNA (945bp) protein (315aa)
Cobalt-zinc-cadmium resistance protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY02_SYNAS
cobalt-zinc-cadmium resistance protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
Ig5181_scaffold_120813_8
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9039..9803
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KFO68844.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KFO68844.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase Tax=Herbaspirillum sp. JC206 RepID=UPI000301AF22
Ig5181_scaffold_120813_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10031..10519
DNA (489bp) protein (163aa)
para-aminobenzoate synthase Tax=Thermodesulfatator atlanticus RepID=UPI0003B78624
para-aminobenzoate synthase subunit I
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10625..11800
DNA (1176bp) protein (392aa)
Para-aminobenzoate synthase, subunit I Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZX4_GRAMM
para-aminobenzoate synthase subunit I
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_11
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11797..12399
DNA (603bp) protein (201aa)
ThiJ/PfpI domain-containing protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R4M4_METFO
DJ-1/PfpI family protein
DJ-1/PfpI family protein {ECO:0000313|EMBL:AIS32854.1}; ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:CEA13962.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
Ig5181_scaffold_120813_trna_1
unknown

Not on your lists

12538..12611
DNA (74bp)
transferRNA Arg
Ig5181_scaffold_120813_12
unknown

Not on your lists

comp(12692..13249)
DNA (558bp) protein (186aa)

This feature has no annotations

Ig5181_scaffold_120813_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13926..14813
DNA (888bp) protein (296aa)
Beta-lactamase domain protein bin=GWF2_Syntrophobacterales_56_9 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
beta-lactamase domain-containing protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_120813_14
unknown

Not on your lists

15043..15528
DNA (486bp) protein (162aa)

This feature has no annotations

Ig5181_scaffold_120813_15
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16029..17606
DNA (1578bp) protein (526aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002E6FEB9
peptide synthetase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Ig5181_scaffold_120813_16
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17739..18440
DNA (702bp) protein (234aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00037E5B87
Methyltransferase type 12 {ECO:0000313|EMBL:KIF80498.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
methylase involved in ubiquinone/menaquinone biosynthesis
Ig5181_scaffold_120813_17
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18489..19238
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Marinobacter santoriniensis NKSG1 RepID=M7CYB9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EMP57240.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
hypothetical protein
Ig5181_scaffold_120813_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19254..19493
DNA (240bp) protein (80aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0003812914
Uncharacterized protein {ECO:0000313|EMBL:KIF83528.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
Ig5181_scaffold_120813_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19550..20341)
DNA (792bp) protein (264aa)
GerE transcriptional regulator Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ27_SYNAS
GerE family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying 20 items

View Taxonomy