ggKbase home page

Ig5181_scaffold_12258

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_12258_1
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Alcohol oxidase Tax=Photobacterium sp. AK15 RepID=L8JGQ2_9GAMM
glucose-methanol-choline oxidoreductase
Tax=BJP_IG2069_Spirochaetales_48_31
Ig5181_scaffold_12258_2
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(320..1222)
DNA (903bp) protein (301aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZR3_DESOH
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=BJP_IG2069_Spirochaetales_48_31
Ig5181_scaffold_12258_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1487..2434
DNA (948bp) protein (316aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LM70_SYNFM
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2674..3564)
DNA (891bp) protein (297aa)
Protease HtpX homolog Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKM6_9DELT
heat shock protein HtpX
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3741..5087)
DNA (1347bp) protein (449aa)
adenosylmethionine--8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4E0_DESCC
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5105..6280)
DNA (1176bp) protein (392aa)
8-amino-7-oxononanoate synthase Tax=Clostridium pasteurianum BC1 RepID=R4K9Y7_CLOPA
8-amino-7-oxononanoate synthase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6283..7005)
DNA (723bp) protein (241aa)
dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DIS7_9FIRM
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7236..8297
DNA (1062bp) protein (354aa)
biotin synthase (EC:2.8.1.6)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003758076
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..9077)
DNA (684bp) protein (228aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Ig5181_scaffold_12258_10
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9239..9730)
DNA (492bp) protein (164aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00037A1386
cell wall-associated hydrolase
Tax=GWA2_Bacteroidetes_32_17_curated
Ig5181_scaffold_12258_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..11166)
DNA (1317bp) protein (439aa)
RmuC family protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA recombination protein RmuC
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11438..11701
DNA (264bp) protein (88aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVA9_SYNAS
cytoplasmic protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11722..12714
DNA (993bp) protein (331aa)
Exported Fe-S-cluster-containing protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVA8_SYNAS
exported Fe-S-cluster-containing protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_14
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12707..13552
DNA (846bp) protein (282aa)
Putative membrane protein Tax=Smithella sp. ME-1 RepID=V4FBE0_9DELT
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
Ig5181_scaffold_12258_15
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13900..14721
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PCT7_DEFDS
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
Ig5181_scaffold_12258_16
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14753..15301
DNA (549bp) protein (183aa)
Transcriptional regulator, PadR family bin=GWA2_Methylomirabilis_73_35 species=Rhodococcus sp. AW25M09 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PadR family transcriptional regulator
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
Ig5181_scaffold_12258_17
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15289..15798
DNA (510bp) protein (170aa)
NUDIX hydrolase Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK68_RUNSL
NUDIX hydrolase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
Ig5181_scaffold_12258_18
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15833..16276
DNA (444bp) protein (148aa)
Putative membrane protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AER8_CARHZ
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
Ig5181_scaffold_12258_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16348..17223
DNA (876bp) protein (292aa)
Nitroreductase Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQQ2_DESRL
nitroreductase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Ig5181_scaffold_12258_20
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

17259..17624
DNA (366bp) protein (122aa)
Tax=RBG_16_Acidobacteria_64_8_curated
Ig5181_scaffold_12258_21
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18018..19511
DNA (1494bp) protein (498aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_22
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19521..20108
DNA (588bp) protein (196aa)
anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE6_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_23
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20105..21115
DNA (1011bp) protein (337aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE2_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_24
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21336..22112
DNA (777bp) protein (259aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUD7_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_25
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22112..22762
DNA (651bp) protein (217aa)
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Syntrophus aciditrophicus (strain SB) RepID=TRPF_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_26
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22762..23943
DNA (1182bp) protein (394aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUD9_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_27
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23952..24746
DNA (795bp) protein (265aa)
Tryptophan synthase alpha chain Tax=Syntrophus aciditrophicus (strain SB) RepID=TRPA_SYNAS
tryptophan synthase subunit alpha
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5181_scaffold_12258_28
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24753..25406
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Mariniradius saccharolyticus AK6 RepID=M7XBQ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS32043.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
hypothetical protein
Ig5181_scaffold_12258_29
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25698..27203)
DNA (1506bp) protein (502aa)
hypothetical protein; K07793 putative tricarboxylic transport membrane protein bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
Ig5181_scaffold_12258_30
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27225..27680)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Acinetobacter sp. NIPH 298 RepID=N9LII9_9GAMM
Tax=BJP_IG2102_Syntrophobacterales_60_12
Displaying items 1-30 of 34 in total

View Taxonomy