ggKbase home page

Ig5181_scaffold_72352

Search features with annotation key words

Displaying items 1-30 of 379 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_72352_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)
Putative uncharacterized protein bin=GWE1_T_denit_62_9 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig5181_scaffold_72352_2
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180..932)
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Thauera sp. 28 RepID=N6ZLC0_9RHOO
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
Ig5181_scaffold_72352_3
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(929..3205)
DNA (2277bp) protein (759aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034C3EA4
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
Ig5181_scaffold_72352_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3218..3745)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LT75_9PROT
peroxiredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig5181_scaffold_72352_5
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3855..4709)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Burkholderia pseudomallei RepID=UPI0003AC7A3B
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDS86854.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei S13.;"
Ig5181_scaffold_72352_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..6877)
DNA (2172bp) protein (724aa)
SNARE associated Golgi protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTH3_ACCPU
SNARE associated Golgi protein {ECO:0000313|EMBL:CDH43129.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
Ig5181_scaffold_72352_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6874..8097)
DNA (1224bp) protein (408aa)
OsmC family protein Tax=Cupriavidus basilensis OR16 RepID=H1SH49_9BURK
Conserved protein of unknown function. Containing OsmC domain
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig5181_scaffold_72352_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8217..9182)
DNA (966bp) protein (322aa)
Putative Fe-S oxidoreductase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRI1_9BURK
Radical SAM domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig5181_scaffold_72352_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9219..10355)
DNA (1137bp) protein (379aa)
hypothetical protein bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig5181_scaffold_72352_10
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10357..11061)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00036AB803
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig5181_scaffold_72352_11
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11058..11573)
DNA (516bp) protein (172aa)
RNA polymerase sigma factor Tax=Methyloversatilis universalis FAM5 RepID=F5R7N2_9RHOO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
RNA polymerase sigma factor
Ig5181_scaffold_72352_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11579..12295)
DNA (717bp) protein (239aa)
Putative cytochrome c-type biogenesis protein putative membrane protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0G3_9PROT
putative cytochrome c-type biogenesis protein; putative membrane protein
Putative cytochrome c-type biogenesis protein putative membrane protein {ECO:0000313|EMBL:CDK97988.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Ig5181_scaffold_72352_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12308..12715)
DNA (408bp) protein (136aa)
Putative Thioredoxin (H-type,TRX-H) Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH44_BRASB
thioredoxin (H-type,TRX-H)
Putative Thioredoxin (H-type,TRX-H) {ECO:0000313|EMBL:ABQ35488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Ig5181_scaffold_72352_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12892..13623
DNA (732bp) protein (244aa)
Di-haem cytochrome c peroxidase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHA5_GALCS
di-heme cytochrome c peroxidase
Tax=CG_Rhodocyc_01
Ig5181_scaffold_72352_15
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13683..13931
DNA (249bp) protein (83aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000371B66D
Uncharacterized protein {ECO:0000313|EMBL:EXI87018.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
Ig5181_scaffold_72352_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..15180
DNA (1149bp) protein (383aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037F6BFF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig5181_scaffold_72352_17
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15177..15899
DNA (723bp) protein (241aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B569D0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig5181_scaffold_72352_18
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15896..16339
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MG26_9PROT
Conserved exported protein of unknown function
Tax=GWA2_Gallionellales_60_18_curated
Ig5181_scaffold_72352_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16363..16833
DNA (471bp) protein (157aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003679E24
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig5181_scaffold_72352_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16814..17944
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036B5BD5
Conserved membrane protein of unknown function
Tax=CG_Rhodocyc_01
Ig5181_scaffold_72352_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17950..18723)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLD1_NITSI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig5181_scaffold_72352_22
unknown

Not on your lists

18952..19095
DNA (144bp) protein (48aa)

This feature has no annotations

Ig5181_scaffold_72352_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19374..21380
DNA (2007bp) protein (669aa)
PAS sensor, signal transduction histidine kinase Tax=Nitrococcus mobilis Nb-231 RepID=A4BMD8_9GAMM
C4-dicarboxylate transport sensor protein dctS
Tax=CG_Rhodocyc_01
Ig5181_scaffold_72352_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21358..22008
DNA (651bp) protein (217aa)
hypothetical protein Tax=Ectothiorhodospiraceae RepID=UPI00036EFBEF
LuxR family transcriptional regulator
Tax=CG_Rhodocyc_01
Ig5181_scaffold_72352_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22186..22437
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig5181_scaffold_72352_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22597..23082
DNA (486bp) protein (162aa)
thiol-disulfide oxidoreductase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B637BF
alkyl hydroperoxide reductase
Tax=CG_Rhodocyc_01
Ig5181_scaffold_72352_27
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23127..24326
DNA (1200bp) protein (400aa)
Outer membrane protein (Porin)-like protein Tax=Comamonas testosteroni KF-1 RepID=B7WZF4_COMTE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig5181_scaffold_72352_28
unknown

Not on your lists

24471..24614
DNA (144bp) protein (48aa)

This feature has no annotations

Ig5181_scaffold_72352_29
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24843..25712
DNA (870bp) protein (290aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUF4_ACCPU
phosphonate ABC transporter substrate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ACV35006.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig5181_scaffold_72352_30
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25709..26605
DNA (897bp) protein (299aa)
Phosphonate ABC transporter permease Tax=Thauera phenylacetica B4P RepID=N6ZU56_9RHOO
Phosphonate ABC transporter permease {ECO:0000313|EMBL:ENO98002.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
phosphonate ABC transporter permease
Displaying items 1-30 of 379 in total

View Taxonomy