ggKbase home page

Ig5181_scaffold_7080

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_7080_1
unknown

Not on your lists

comp(84..1148)
DNA (1065bp) protein (355aa)

This feature has no annotations

Ig5181_scaffold_7080_2
unknown

Not on your lists

comp(1410..2384)
DNA (975bp) protein (325aa)

This feature has no annotations

Ig5181_scaffold_7080_3
unknown

Not on your lists

comp(2417..2560)
DNA (144bp) protein (48aa)

This feature has no annotations

Ig5181_scaffold_7080_4
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2798..4723)
DNA (1926bp) protein (642aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI0003605F9D
NHL repeat containing protein {ECO:0000313|EMBL:AHM61628.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
Ig5181_scaffold_7080_5
unknown

Not on your lists

comp(4886..5221)
DNA (336bp) protein (112aa)

This feature has no annotations

Ig5181_scaffold_7080_6
unknown

Not on your lists

5333..5554
DNA (222bp) protein (74aa)

This feature has no annotations

Ig5181_scaffold_7080_7
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5593..7023
DNA (1431bp) protein (477aa)
Bacteriophytochrome (Light-regulated signal transduction histidine kinase) bin=GWF2_Bacteroidetes_33_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
multi-sensor signal transduction histidine kinase
Tax=GWE2_Bacteroidetes_32_14_curated
Ig5181_scaffold_7080_8
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

7057..7704
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XGQ4_DESMR
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
Ig5181_scaffold_7080_9
GWF2_TM6_37_49, TM6, Bacteria

Not on your lists

7705..9780
DNA (2076bp) protein (692aa)
GAF sensor signal transduction histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPV6_NIAKG
PAS domain S-box {ECO:0000313|EMBL:KKQ32051.1}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_37_49.;"
GAF sensor signal transduction histidine kinase
Ig5181_scaffold_7080_10
GWF2_TM6_37_49, TM6, Bacteria

Not on your lists

9777..10220
DNA (444bp) protein (148aa)
Putative response regulator receiver protein Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IRS8_LEPFC
Response regulator (CheY-like protein receiver and winged-helix DNA-binding domain containing protein) {ECO:0000313|EMBL:KKQ32050.1}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_37_49.;"
response regulator receiver protein
Ig5181_scaffold_7080_11
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10221..12377
DNA (2157bp) protein (719aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
PAS/PAC sensor protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
Ig5181_scaffold_7080_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

12374..13267
DNA (894bp) protein (298aa)
Two-component sensor kinase bin=GWC2_CP_Nitrospirae-rel_42_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
sensory box/GGDEF family protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Ig5181_scaffold_7080_13
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13272..14999
DNA (1728bp) protein (576aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003474DC4
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AFY61113.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
Ig5181_scaffold_7080_14
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15084..15491)
DNA (408bp) protein (136aa)
PilT protein domain protein Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F180_SPICH
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AEJ18724.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ig5181_scaffold_7080_15
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15488..15742)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F179_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ18723.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ig5181_scaffold_7080_16
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15848..17227)
DNA (1380bp) protein (460aa)
AAA ATPase Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYB7_SPICH
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AEJ18276.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Ig5181_scaffold_7080_17
GWA1_OD1_46_11_plus_minus, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17367..19019)
DNA (1653bp) protein (551aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2D7R7_9BACT
Cell wall surface anchor family protein {ECO:0000313|EMBL:KKU21959.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_46_11.;"
Ig5181_scaffold_7080_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19300..20466
DNA (1167bp) protein (389aa)
protein with a bacterial immunoglobulin-like domain Tax=Acidovorax radicis RepID=UPI0002375F46
vir region protein-like protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Ig5181_scaffold_7080_19
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20665..21213)
DNA (549bp) protein (183aa)
PilT protein domain protein Tax=Treponema saccharophilum DSM 2985 RepID=H7ELP2_9SPIO
PilT protein domain protein {ECO:0000313|EMBL:EIC01583.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
twitching motility protein PilT
Ig5181_scaffold_7080_20
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21182..21421)
DNA (240bp) protein (80aa)
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KPB8_TRELE
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:ERJ93920.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
hypothetical protein
Ig5181_scaffold_7080_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

21593..23395
DNA (1803bp) protein (601aa)
Putative uncharacterized protein Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YHH3_TREPZ
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
Ig5181_scaffold_7080_22
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

23665..24030
DNA (366bp) protein (122aa)
HicB Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YPS6_9CHLB
HicB {ECO:0000313|EMBL:EAT58273.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
hypothetical protein
Ig5181_scaffold_7080_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24133..25347
DNA (1215bp) protein (405aa)
Putative ATPase (AAA+ superfamily) Tax=Firmicutes bacterium CAG:424 RepID=R6RIA9_9FIRM
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDC45049.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATPase
Ig5181_scaffold_7080_24
unknown

Not on your lists

comp(25508..26038)
DNA (531bp) protein (177aa)

This feature has no annotations

Ig5181_scaffold_7080_25
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(26180..26941)
DNA (762bp) protein (254aa)
Acyltransferase Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KPN2_TRELE
Acyltransferase {ECO:0000313|EMBL:ERJ94237.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
acyltransferase domain-containing protein
Ig5181_scaffold_7080_26
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(26943..28082)
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Treponema maltophilum ATCC 51939 RepID=S3K0K7_TREMA
family 2 glycosyltransferase
Tax=RBG_13_Spirochaetes_68_11_curated
Ig5181_scaffold_7080_27
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28079..28849)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Treponema maltophilum ATCC 51939 RepID=S3KHP2_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31762.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
Ig5181_scaffold_7080_28
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

28873..30252
DNA (1380bp) protein (460aa)
Peptidase U34, dipeptidase bin=GWB1_Spirochaetes_59_5 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
peptidase U34
Tax=GWB1_Spirochaetes_59_5_curated
Ig5181_scaffold_7080_29
unknown

Not on your lists

30272..30910
DNA (639bp) protein (213aa)

This feature has no annotations

Ig5181_scaffold_7080_30
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(30921..31349)
DNA (429bp) protein (143aa)
PilT protein domain protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKK8_9DELT
PilT domain-containing protein
Tax=GWC1_Treponema_61_84_curated
Displaying items 1-30 of 81 in total

View Taxonomy