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Ig5181_scaffold_23729

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_23729_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..641)
DNA (639bp) protein (213aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:BAH39744.1}; EC=1.1.1.31 {ECO:0000313|EMBL:BAH39744.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-hydroxyisobutyrate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
Ig5181_scaffold_23729_2
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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700..1923
DNA (1224bp) protein (408aa)
DNA polymerase IV Tax=Nitrospina gracilis 3/211 RepID=M1Z9H3_9BACT
DNA polymerase IV
Tax=RBG_13_Chloroflexi_56_8b_curated
Ig5181_scaffold_23729_3
unknown

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2101..2505
DNA (405bp) protein (135aa)

This feature has no annotations

Ig5181_scaffold_23729_4
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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comp(2626..3489)
DNA (864bp) protein (288aa)
S-layer region-like bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
hypothetical protein
Tax=GWF2_Melainabacteria_32_7_curated
Ig5181_scaffold_23729_5

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3748..4152
DNA (405bp) protein (135aa)
Marine sediment metagenome DNA, contig: S12H4_S22572 {ECO:0000313|EMBL:GAJ21774.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase bin=GWD2_RBX1-related_39_127 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
7-cyano-7-deazaguanine reductase
Ig5181_scaffold_23729_6
unknown

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4418..4870
DNA (453bp) protein (151aa)

This feature has no annotations

Ig5181_scaffold_23729_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5084..6556
DNA (1473bp) protein (491aa)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Ig5181_scaffold_23729_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6842..8758
DNA (1917bp) protein (639aa)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ig5181_scaffold_23729_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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8926..9603
DNA (678bp) protein (226aa)
Transcriptional regulator, TetR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U156_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH82546.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TetR family transcriptional regulator
Ig5181_scaffold_23729_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9600..11432
DNA (1833bp) protein (611aa)
Acyl-CoA dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
Ig5181_scaffold_23729_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11539..12735)
DNA (1197bp) protein (399aa)
Putative sodium/dicarboxylate symporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F9_GEMAT
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AHG87929.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ig5181_scaffold_23729_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12844..14280)
DNA (1437bp) protein (479aa)
Cytochrome c family protein Tax=Cystobacter fuscus DSM 2262 RepID=S9NWL3_9DELT
Tax=GWC2_Gemmatimonadetes_71_10_curated
Ig5181_scaffold_23729_13
unknown

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comp(14277..15368)
DNA (1092bp) protein (364aa)

This feature has no annotations

Displaying 13 items

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