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Ig5181_scaffold_1172

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_1172_1
unknown

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comp(65..724)
DNA (660bp) protein (220aa)

This feature has no annotations

Ig5181_scaffold_1172_2
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(739..1290)
DNA (552bp) protein (184aa)
Putative Rhs family protein Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3VJR4_XENNA
Rhs family protein
Putative Rhs family protein {ECO:0000313|EMBL:CBJ90973.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /; NCIB 9965 / AN6).;"
Ig5181_scaffold_1172_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1642..4416
DNA (2775bp) protein (925aa)
UvrABC system protein A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
excinuclease ABC, A subunit
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Ig5181_scaffold_1172_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(4516..5898)
DNA (1383bp) protein (461aa)
putative aromatic amino acid decarboxylase bin=RBG_16_Aminicenantes_63_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative aromatic amino acid decarboxylase
Tax=RBG_16_Aminicenantes_63_16_curated
Ig5181_scaffold_1172_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5898..7202)
DNA (1305bp) protein (435aa)
Xaa-Pro aminopeptidase Tax=Candidatus Regiella insecticola R5.15 RepID=G2H1E1_9ENTR
aminopeptidase P
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ig5181_scaffold_1172_6

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comp(7315..7473)
DNA (159bp) protein (53aa)
50S ribosomal protein L33 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABJ7_GEMAT
Marine sediment metagenome DNA, contig: S01H4_S11943 {ECO:0000313|EMBL:GAG90341.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpmG; 50S ribosomal protein L33
Ig5181_scaffold_1172_7
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(7494..7799)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 Tax=Coraliomargarita sp. CAG:312 RepID=R7L8B1_9BACT
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
30S ribosomal protein S14
Ig5181_scaffold_1172_8
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7933..9447)
DNA (1515bp) protein (505aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00031043A6
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
Ig5181_scaffold_1172_trna_2
unknown

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comp(9720..9792)
DNA (73bp)
transferRNA Asn
Ig5181_scaffold_1172_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10290..11354
DNA (1065bp) protein (355aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7)
DNA polymerase III delta' subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ig5181_scaffold_1172_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11354..11851
DNA (498bp) protein (166aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=MOAC_AZOC5
moaC; molybdopterin cofactor biosynthesis protein
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000255|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000255|HAMAP-Rule:MF_01224}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Ig5181_scaffold_1172_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11852..12478
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ig5181_scaffold_1172_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12503..13981)
DNA (1479bp) protein (493aa)
Putative transglycosylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
putative transglycosylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ig5181_scaffold_1172_13
unknown

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comp(14158..14400)
DNA (243bp) protein (81aa)

This feature has no annotations

Ig5181_scaffold_1172_14
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(14483..15382)
DNA (900bp) protein (300aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ACX51391.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ACX51391.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
Branched-chain amino acid aminotransferase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAW4_AMMDK
Ig5181_scaffold_1172_trna_1
unknown

Not on your lists

15532..15605
DNA (74bp)
transferRNA Lys
Ig5181_scaffold_1172_15
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15751..16743
DNA (993bp) protein (331aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Biotin synthase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKB1_HALO1
Ig5181_scaffold_1172_16
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16971..17123
DNA (153bp) protein (51aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4M7_GEOLS
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Displaying 18 items

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