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Ig5181_scaffold_117421

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5181_scaffold_117421_1
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..236
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Roseovarius sp. 217 RepID=A3W7U7_9RHOB
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJS42297.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
ErfK/YbiS/YcfS/YnhG family protein
Ig5181_scaffold_117421_2
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(276..548)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LSX4_DINSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV95341.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
Ig5181_scaffold_117421_3
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(832..2037)
DNA (1206bp) protein (402aa)
Transposase and inactivated derivatives Tax=Roseovarius sp. 217 RepID=A3W3Z2_9RHOB
Transposase and inactivated derivatives {ECO:0000313|EMBL:EAQ24931.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
plasmid replication protein RepC`
Ig5181_scaffold_117421_4
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2210..2869)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Roseovarius sp. 217 RepID=A3W6E1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ23777.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
hypothetical protein
Ig5181_scaffold_117421_5
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3006..3761
DNA (756bp) protein (252aa)
UPI0003D6D347 related cluster Tax=unknown RepID=UPI0003D6D347
hypothetical protein
Plasmid pGal_B134, complete sequence {ECO:0000313|EMBL:AHD11726.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis DSM 26640.;"
Ig5181_scaffold_117421_6
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4431..4724)
DNA (294bp) protein (98aa)
UPI0003D6CFF2 related cluster Tax=unknown RepID=UPI0003D6CFF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM85997.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
Ig5181_scaffold_117421_7

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4881..5246
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Ruegeria sp. (strain TM1040) RepID=Q1GN11_RUEST
Uncharacterized protein {ECO:0000313|EMBL:KKL90916.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Ig5181_scaffold_117421_8
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5290..5904
DNA (615bp) protein (205aa)
Lytic transglycosylase, catalytic Tax=Roseovarius sp. TM1035 RepID=A6E5M5_9RHOB
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EDM30136.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
lytic transglycosylase
Ig5181_scaffold_117421_9
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5901..6194
DNA (294bp) protein (98aa)
Conjugal transfer (TrbC) or type IV secretory pathway (VirB2) protein Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LTZ4_DINSH
VIRB2 type IV secretion {ECO:0000313|EMBL:KCV81053.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;"
conjugal transfer protein TrbC
Ig5181_scaffold_117421_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6187..6465
DNA (279bp) protein (93aa)
Type IV secretory pathway VirB3 family protein Tax=Rhodobacteraceae RepID=A8LT06_DINSH
type IV secretory pathway VirB3 family protein
Type IV secretory pathway, VirB3-like protein {ECO:0000313|EMBL:EAQ11696.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
Ig5181_scaffold_117421_11
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6455..6868
DNA (414bp) protein (138aa)
UPI0003D6A829 related cluster Tax=unknown RepID=UPI0003D6A829
Type IV secretory pathway, VirB4 component
Plasmid pGal_B134, complete sequence {ECO:0000313|EMBL:AHD11718.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis DSM 26640.;"
Ig5181_scaffold_117421_12
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6865..7707)
DNA (843bp) protein (281aa)
ISChy4, transposition helper protein Tax=Oceanicola batsensis HTCC2597 RepID=A3TZE7_9RHOB
ISChy4, transposition helper protein {ECO:0000313|EMBL:EAQ02428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
transposase
Ig5181_scaffold_117421_13

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comp(7704..8912)
DNA (1209bp) protein (403aa)
Transposase Tax=uncultured bacterium RepID=C6KUC1_9BACT
Transposase {ECO:0000313|EMBL:BAH89569.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
Displaying 13 items

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