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Ig5185_scaffold_5210

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5185_scaffold_5210_1

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comp(3..260)
DNA (258bp) protein (86aa)
Putative 2-isopropylmalate synthase {ECO:0000313|EMBL:CEG12915.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CEG12915.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
(R)-citramalate synthase (EC:2.3.3.13)
Probable 2-isopropylmalate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=LEU1_METKA
Ig5185_scaffold_5210_2

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comp(257..1369)
DNA (1113bp) protein (371aa)
ATP-binding protein n=1 Tax=uncultured archaeon GZfos32E7 RepID=Q64AA2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CEG11628.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
ATPase
Ig5185_scaffold_5210_3

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comp(1821..2798)
DNA (978bp) protein (326aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000313|EMBL:CEG11103.1}; EC=6.3.5.- {ECO:0000313|EMBL:CEG11103.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1)
Glutamyl-tRNA(Gln) amidotransferase subunit D n=2 Tax=Pyrococcus furiosus RepID=GATD_PYRFU
Ig5185_scaffold_5210_4
unknown

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comp(2889..3329)
DNA (441bp) protein (147aa)

This feature has no annotations

Ig5185_scaffold_5210_5
unknown

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comp(3412..3615)
DNA (204bp) protein (68aa)

This feature has no annotations

Ig5185_scaffold_5210_6

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4109..4639
DNA (531bp) protein (177aa)
Metallo-beta-lactamase family protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AD86_THEID
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CEG12912.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
metallo-beta-lactamase family protein
Ig5185_scaffold_5210_7
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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4667..4846
DNA (180bp) protein (60aa)
Uncharacterized protein id=3502187 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Uncharacterized protein {ECO:0000313|EMBL:GAB61087.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
Ig5185_scaffold_5210_8
unknown

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4843..4941
DNA (99bp) protein (33aa)

This feature has no annotations

Ig5185_scaffold_5210_9
CG_CPArch01-01, CG_CPArch01, Archaea

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5098..6474
DNA (1377bp) protein (459aa)
id=5045274 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_CPArch01-01
Ig5185_scaffold_5210_10
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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6827..7459
DNA (633bp) protein (211aa)
Type II restriction modification system, restriction subunit id=4268894 bin=GWA2_Ignavibacteria-rel_35_8 species=Picrophilus torridus genus=Picrophilus taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
Ig5185_scaffold_5210_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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7520..7846
DNA (327bp) protein (109aa)
hypothetical protein id=1918762 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5185_scaffold_5210_12

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7836..8750
DNA (915bp) protein (305aa)
Type II restriction modification system,methylation subunit {ECO:0000313|EMBL:CEG11361.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CEG11361.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
Type II restriction modification system,methylation subunit n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VIC9_CLOAI
SAM-dependent methyltransferase
Ig5185_scaffold_5210_13

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comp(8772..9533)
DNA (762bp) protein (254aa)
TraB family protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CEG13095.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
TraB family protein
Ig5185_scaffold_5210_14

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9588..9908
DNA (321bp) protein (107aa)
Glutamate--tRNA ligase {ECO:0000313|EMBL:CEG13094.1}; EC=6.1.1.17 {ECO:0000313|EMBL:CEG13094.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=SYE_METTM
Displaying 14 items

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