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Ig5185_scaffold_466

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5185_scaffold_466_1
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..601
DNA (600bp) protein (200aa)
amidase (EC:6.3.5.-)
Amidase n=1 Tax=Rhodobacter capsulatus B6 RepID=V8GXX9_RHOCA
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_2
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

719..1897
DNA (1179bp) protein (393aa)
putative aspartate aminotransferase (EC:2.6.1.17 2.6.1.11) rbh
Aminotransferase class I and II n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXC7_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_3
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1908..4790
DNA (2883bp) protein (961aa)
Cell division protein FtsK n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5AS30_RHOCB rbh
ftsK; cell division protein FtsK rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_4
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4837..5439
DNA (603bp) protein (201aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=uncultured bacterium RepID=K2FK43_9BACT
outer membrane lipoprotein carrier protein LolA
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_5
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5436..6014)
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=2730567 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
lipoprotein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_6
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6194..6520
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EFF8_9RHOB
hemimethylated DNA-binding protein family
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_7
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6521..7015)
DNA (495bp) protein (165aa)
rsbW; anti-sigma regulatory factor (EC:2.7.11.1)
Serine/threonine protein kinase n=3 Tax=Rhodobacter capsulatus RepID=V8GWU9_RHOCA
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_8
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7005..7343)
DNA (339bp) protein (113aa)
Anti-sigma factor antagonist n=7 Tax=Rhodobacter capsulatus RepID=D5AS25_RHOCB
rsbV; anti-sigma-factor antagonist
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_9
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7439..8617
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Roseovarius sp. 217 RepID=A3VZI1_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_10
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8690..9145
DNA (456bp) protein (152aa)
Diguanylate cyclase n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HG88_RHOCA
GAF domain-containing protein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_11
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9205..9828
DNA (624bp) protein (208aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXE4_9RHOB
homoserine/homoserine lactone efflux protein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_12
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9825..10478
DNA (654bp) protein (218aa)
rluA; ribosomal large subunit pseudouridine synthase A (EC:5.4.99.12)
23S rRNA/tRNA pseudouridine synthase A n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HGE0_RHOCA rbh
23S rRNA/tRNA pseudouridine synthase A {ECO:0000313|EMBL:KEO54167.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
Ig5185_scaffold_466_13
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10534..11973)
DNA (1440bp) protein (480aa)
Aldehyde Dehydrogenase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXE9_9RHOB rbh
aldehyde dehydrogenase rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_14
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12069..12872)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGN5_9BACT rbh
glycosyltransferase involved in LPS biosynthesis
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_15
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13136..15280)
DNA (2145bp) protein (715aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=PNP_RHOSK
polynucleotide phosphorylase/polyadenylase
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_16
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15577..15846)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=uncultured bacterium RepID=K2EGG2_9BACT
rpsO; 30S ribosomal protein S15
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_17
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15990..17039)
DNA (1050bp) protein (350aa)
Alkaline phosphatase (EC:3.1.3.1)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FLN0_9RHOB
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_18
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17108..17686)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EK12_9RHOB
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_19
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17711..18610)
DNA (900bp) protein (300aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.12) rbh
tRNA pseudouridine synthase B n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HBN2_RHOCA rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_20
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18665..18931)
DNA (267bp) protein (89aa)
Ribosome-binding factor A n=5 Tax=Rhodobacter capsulatus RepID=D5ALX1_RHOCB
rbfA; ribosome-binding factor A
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_21
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19182..19991
DNA (810bp) protein (270aa)
dihydrodipicolinate reductase (EC:1.3.1.26) rbh
Dihydrodipicolinate reductase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMV8_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_22
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20046..20234)
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=2622100 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanicola batsensis genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_23
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20309..21589
DNA (1281bp) protein (427aa)
rsmB1; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-) rbh
16S rRNA methyltransferase n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HBN6_RHOCA rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_24
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21612..23471
DNA (1860bp) protein (620aa)
Heparinase II/III family protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HNR0_RHOCA rbh
heparinase II/III family protein rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_25
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23490..25076
DNA (1587bp) protein (529aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10) rbh
Purine biosynthesis protein purH n=1 Tax=Rhodobacter capsulatus B6 RepID=V8H760_RHOCA rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_26
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25080..25574
DNA (495bp) protein (165aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Peptidase A8 n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJJ7_9RHOB
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_27
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25604..26146
DNA (543bp) protein (181aa)
Lipoprotein, putative n=6 Tax=Rhodobacter capsulatus RepID=D5ALH8_RHOCB
lipoprotein
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_28
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26229..27467
DNA (1239bp) protein (413aa)
M16 family peptidase (EC:3.4.24.-)
Zinc protease n=1 Tax=Rhodobacter capsulatus B6 RepID=V8H8H9_RHOCA
Tax=BJP_IG2158_Rhodobacterales_64_37
Ig5185_scaffold_466_29
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27464..28588
DNA (1125bp) protein (375aa)
M16 family peptidase (EC:3.4.24.-)
Peptidase, M16 family n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5ALH6_RHOCB
Tax=BJP_IG2158_Rhodobacterales_64_37
Displaying 29 items

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