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CARSLU_45

Alias: CARSLU_48

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARSLU_45_1
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..657)
DNA (657bp) protein (219aa)
Prephenate dehydratase n=2 Tax=Staphylococcus lugdunensis RepID=E6MCQ0_STALU (db=UNIREF evalue=3.0e-122 bit_score=441.0 identity=98.62 coverage=99.0867579908676)
putative prephenate dehydratase
putative prephenate dehydratase
PREPHENATE DEHYDRATASE (P PROTEIN) (db=HMMPanther db_id=PTHR21022 from=3 to=209 evalue=1.8e-49)
CARSLU_45_2
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2356..3405
DNA (1050bp) protein (350aa)
Nicotinate phosphoribosyltransferase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIT3_STALH (db=UNIREF evalue=0.0 bit_score=718.0 identity=100.0 coverage=98.5714285714286)
Nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate/Quinolinate PRTase C-terminal domain-like (db=superfamily db_id=SSF51690 from=40 to=346 evalue=4.9e-142 interpro_id=IPR002638 interpro_description=Quinolinate phosphoribosyl transferase, C-terminal GO=Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity (GO:0004514), Biological Process: NAD biosynthetic process (GO:0009435))
NAPRTase_put: putative nicotinate phosph (db=HMMTigr db_id=TIGR01513 from=1 to=347 evalue=7.1e-138 interpro_id=IPR006405 interpro_description=Nicotinate phosphoribosyltransferase putative GO=Molecular Function: nicotinate phosphoribosyltransferase activity (GO:0004516), Biological Process: nicotinate nucleotide salvage (GO:0019358))
CARSLU_45_3
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3525..4364
DNA (840bp) protein (280aa)
putative NAD synthetase
putative NAD synthetase
NH(3)-dependent NAD(+) synthetase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIT4_STALH (db=UNIREF evalue=2.0e-154 bit_score=548.0 identity=100.0 coverage=99.2857142857143)
seg (db=Seg db_id=seg from=7 to=18)
CARSLU_45_4
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4437..5039
DNA (603bp) protein (201aa)
hypothetical protein
hypothetical protein
UPF0316 protein SLGD_01016 n=2 Tax=Staphylococcus lugdunensis RepID=D3QIT5_STALH (db=UNIREF evalue=2.0e-99 bit_score=364.0 identity=100.0 coverage=99.0049751243781)
seg (db=Seg db_id=seg from=43 to=63)
CARSLU_45_5
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5020..5199
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QIT6_STALH (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=100.0 coverage=96.6666666666667)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU83181.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
CARSLU_45_6
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5576..6871
DNA (1296bp) protein (432aa)
adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=99 Tax=Staphylococcus RepID=PUR8_STAA8 (db=UNIREF evalue=0.0 bit_score=845.0 identity=93.26 coverage=99.3055555555556)
FUMARATE_LYASES (db=PatternScan db_id=PS00163 from=261 to=270 evalue=0.0 interpro_id=IPR020557 interpro_description=Fumarate lyase, conserved site GO=Molecular Function: catalytic activity (GO:0003824))
CARSLU_45_7
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6967..7269
DNA (303bp) protein (101aa)
TrpR like protein, YerC/YecD n=105 Tax=Staphylococcus RepID=A5IU74_STAA9 (db=UNIREF evalue=7.0e-50 bit_score=199.0 identity=96.0 coverage=98.019801980198)
His repressor
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=7 to=94 evalue=4.0e-54 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD)
(db=HMMPfam db_id=PF01371 from=10 to=94 evalue=3.5e-34 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARSLU_45_8
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7409..8101
DNA (693bp) protein (231aa)
Putative glycerol-1-phosphate prenyltransferase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIT9_STALH (db=UNIREF evalue=3.0e-132 bit_score=474.0 identity=100.0 coverage=99.1341991341991)
pcrB; PcrB family protein rbh
pcrB; PcrB family protein rbh
no description (db=Gene3D db_id=G3DSA:3.20.20.390 from=1 to=227 evalue=9.8e-80 interpro_id=IPR008205 interpro_description=Geranylgeranylglyceryl phosphate synthase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
CARSLU_45_9
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8101..10293
DNA (2193bp) protein (731aa)
ATP-dependent DNA helicase UvrD/PcrA n=3 Tax=Staphylococcus RepID=D3QIU0_STALH (db=UNIREF evalue=0.0 bit_score=1434.0 identity=99.45 coverage=99.452804377565)
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-)
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-)
coiled-coil (db=Coil db_id=coil from=147 to=168 evalue=NA)
CARSLU_45_10
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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10297..12300
DNA (2004bp) protein (668aa)
DNA ligase n=2 Tax=Staphylococcus lugdunensis RepID=D3QIU1_STALH (db=UNIREF evalue=0.0 bit_score=1377.0 identity=100.0 coverage=99.7005988023952)
lig; DNA ligase
lig; DNA ligase
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
CARSLU_45_11
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12313..13503
DNA (1191bp) protein (397aa)
pheromone cAM373 precursor lipoprotein CamS
pheromone cAM373 precursor lipoprotein CamS
Staphylococcal epidermidis sex pheromone n=2 Tax=Staphylococcus lugdunensis RepID=E6MCN9_STALU (db=UNIREF evalue=0.0 bit_score=775.0 identity=99.75 coverage=99.4962216624685)
CamS (db=HMMPIR db_id=PIRSF012509 from=1 to=396 evalue=0.0 interpro_id=IPR011426 interpro_description=CamS sex pheromone cAM373)
CARSLU_45_12
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13668..14057
DNA (390bp) protein (130aa)
glyoxalase family protein
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=114 evalue=4.6e-17)
(db=HMMPfam db_id=PF00903 from=3 to=111 evalue=1.6e-08 interpro_id=IPR004360 interpro_description=Glyoxalase/fosfomycin resistance/dioxygenase)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=2 to=114 evalue=1.8e-08)
CARSLU_45_13
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14390..14599)
DNA (210bp) protein (70aa)
putP; high affinity proline permease
Sodium/proline symporter n=2 Tax=Staphylococcus lugdunensis RepID=D3QIU4_STALH (db=UNIREF evalue=1.0e-24 bit_score=115.0 identity=100.0 coverage=97.1428571428571)
seg (db=Seg db_id=seg from=6 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
Displaying 13 items

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