ggKbase home page

CARSLU_50

Alias: CARSLU_4

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARSLU_50_1
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..660
DNA (660bp) protein (220aa)
IsdK; NEAT domain family protein
Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC n=2 Tax=Staphylococcus lugdunensis RepID=D3QF12_STALH (db=UNIREF evalue=4.0e-85 bit_score=317.0 identity=89.95 coverage=98.1818181818182)
seg (db=Seg db_id=seg from=77 to=96)
seg (db=Seg db_id=seg from=102 to=134)
CARSLU_50_2
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

669..1559
DNA (891bp) protein (297aa)
isdE; putative transport system extracellular binding lipoprotein
isdE; putative transport system extracellular binding lipoprotein
Heme transporter IsdDEF, lipoprotein IsdE n=2 Tax=Staphylococcus lugdunensis RepID=D3QF13_STALH (db=UNIREF evalue=4.0e-163 bit_score=577.0 identity=99.66 coverage=99.3265993265993)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=0.0)
CARSLU_50_3
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1581..2555
DNA (975bp) protein (325aa)
isdF; iron/heme permease
isdF; iron/heme permease
Heme transporter IsdDEF, permease component IsdF n=2 Tax=Staphylococcus lugdunensis RepID=D3QF14_STALH (db=UNIREF evalue=1.0e-166 bit_score=589.0 identity=99.69 coverage=99.3846153846154)
seg (db=Seg db_id=seg from=183 to=199)
CARSLU_50_4
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2536..3315
DNA (780bp) protein (260aa)
Heme transporter analogous to IsdDEF, ATP-binding protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QF15_STALH (db=UNIREF evalue=1.0e-149 bit_score=532.0 identity=100.0 coverage=99.2307692307692)
hypothetical ABC transporter subunit
hypothetical ABC transporter subunit
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=137 to=151 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
CARSLU_50_5
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3312..4034
DNA (723bp) protein (241aa)
NPQTN specific sortase B n=2 Tax=Staphylococcus lugdunensis RepID=D3QF16_STALH (db=UNIREF evalue=8.0e-138 bit_score=493.0 identity=99.58 coverage=99.1701244813278)
NPQTN specific sortase B
NPQTN specific sortase B
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
CARSLU_50_6
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4052..4375
DNA (324bp) protein (108aa)
isdG; heme-degrading monooxygenase IsdG
Heme-degrading monooxygenase isdG n=2 Tax=Staphylococcus lugdunensis RepID=D3QF17_STALH (db=UNIREF evalue=7.0e-57 bit_score=222.0 identity=100.0 coverage=98.1481481481482)
no description (db=Gene3D db_id=G3DSA:3.30.70.900 from=2 to=100 evalue=6.1e-26)
Dimeric alpha+beta barrel (db=superfamily db_id=SSF54909 from=1 to=105 evalue=1.5e-20 interpro_id=IPR011008 interpro_description=Dimeric alpha-beta barrel)
CARSLU_50_7
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4449..5942
DNA (1494bp) protein (498aa)
autolysin rbh
autolysin rbh
N-acetylmuramoyl-L-alanine amidase family 4, needed for cell separation and autolysis n=2 Tax=Staphylococcus lugdunensis RepID=D3QF47_STALH (db=UNIREF evalue=0.0 bit_score=973.0 identity=99.4 coverage=99.5983935742972)
seg (db=Seg db_id=seg from=32 to=44)
CARSLU_50_8
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7393..8388)
DNA (996bp) protein (332aa)
sirB; putative siderophore transport system permease rbh
sirB; putative siderophore transport system permease rbh
Heme transporter IsdDEF, permease component IsdF n=2 Tax=Staphylococcus lugdunensis RepID=D3QF20_STALH (db=UNIREF evalue=6.0e-154 bit_score=547.0 identity=100.0 coverage=99.3975903614458)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=170)
CARSLU_50_9
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8404..9396)
DNA (993bp) protein (331aa)
sirA; lipoprotein
sirA; lipoprotein
Siderophore staphylobactin ABC transporter, substrate-binding protein SirA, putative n=2 Tax=Staphylococcus lugdunensis RepID=D3QF21_STALH (db=UNIREF evalue=1.0e-179 bit_score=632.0 identity=99.7 coverage=99.3957703927493)
seg (db=Seg db_id=seg from=164 to=178)
CARSLU_50_10
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9759..10367)
DNA (609bp) protein (203aa)
Protease synthase and sporulation protein PAI 2 n=2 Tax=Staphylococcus lugdunensis RepID=E6MC10_STALU (db=UNIREF evalue=3.0e-114 bit_score=414.0 identity=98.51 coverage=99.0147783251232)
hypothetical protein
hypothetical protein
coiled-coil (db=Coil db_id=coil from=180 to=201 evalue=NA)
CARSLU_50_11
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11894..12826)
DNA (933bp) protein (311aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=2 Tax=Staphylococcus lugdunensis RepID=D3QF26_STALH (db=UNIREF evalue=3.0e-171 bit_score=604.0 identity=99.68 coverage=99.3569131832797)
seg (db=Seg db_id=seg from=4 to=17)
CARSLU_50_12
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14392..14565
DNA (174bp) protein (58aa)
Multiple sugar-binding transport ATP-binding protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QF27_STALH (db=UNIREF evalue=6.0e-26 bit_score=119.0 identity=98.25 coverage=96.551724137931)
ABC transporter ATP-binding protein
MOP-like (db=superfamily db_id=SSF50331 from=3 to=43 evalue=4.5e-06 interpro_id=IPR008995 interpro_description=Molybdate/tungstate binding GO=Molecular Function: transporter activity (GO:0005215), Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Molecular Function: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820), Cellular Component: ATP-binding cassette (ABC) transporter complex (GO:0043190))
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFU83510.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EFU83510.1};; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" sourc
CARSLU_50_13
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14593..15561
DNA (969bp) protein (323aa)
hypothetical transporter subunit
hypothetical transporter subunit
Maltose/maltodextrin transport permease-like protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QF28_STALH (db=UNIREF evalue=7.0e-151 bit_score=537.0 identity=100.0 coverage=99.3808049535604)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
CARSLU_50_14
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15572..17263
DNA (1692bp) protein (564aa)
hypothetical protein rbh
hypothetical protein rbh
ABC transporter (Membrane spanning protein) n=2 Tax=Staphylococcus lugdunensis RepID=D3QF29_STALH (db=UNIREF evalue=0.0 bit_score=1059.0 identity=99.82 coverage=99.645390070922)
seg (db=Seg db_id=seg from=143 to=155)
CARSLU_50_15
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17277..18173
DNA (897bp) protein (299aa)
hypothetical protein rbh
hypothetical protein rbh
Maltose/maltodextrin transport permease n=2 Tax=Staphylococcus lugdunensis RepID=D3QF30_STALH (db=UNIREF evalue=1.0e-145 bit_score=519.0 identity=100.0 coverage=92.3076923076923)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
CARSLU_50_16
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18187..19047
DNA (861bp) protein (287aa)
hypothetical calcineurin-like phosphoesterase
hypothetical calcineurin-like phosphoesterase
Phosphohydrolase, Icc family n=2 Tax=Staphylococcus lugdunensis RepID=D3QF31_STALH (db=UNIREF evalue=6.0e-170 bit_score=600.0 identity=99.65 coverage=99.3031358885017)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=4 to=284 evalue=2.1e-25)
CARSLU_50_17
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19841..20341
DNA (501bp) protein (167aa)
Na+ driven multidrug efflux pump n=2 Tax=Staphylococcus lugdunensis RepID=D3QFJ7_STALH (db=UNIREF evalue=1.0e-92 bit_score=341.0 identity=100.0 coverage=98.8023952095808)
MatE domain family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
CARSLU_50_18
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20702..21091
DNA (390bp) protein (130aa)
Lactose phosphotransferase system repressor n=2 Tax=Staphylococcus lugdunensis RepID=D3QFJ8_STALH (db=UNIREF evalue=6.0e-71 bit_score=269.0 identity=100.0 coverage=98.4615384615385)
lactose phosphotransferase system repressor
(db=HMMPfam db_id=PF00455 from=15 to=112 evalue=2.8e-19 interpro_id=IPR014036 interpro_description=Transcription regulator HTH, DeoR)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=35 to=116 evalue=2.3e-10)
CARSLU_50_19
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21215..21793
DNA (579bp) protein (193aa)
Phosphoglycerate mutase family n=2 Tax=Staphylococcus lugdunensis RepID=D3QFJ9_STALH (db=UNIREF evalue=1.0e-110 bit_score=402.0 identity=99.48 coverage=98.9637305699482)
phosphoglycerate mutase family protein
phosphoglycerate mutase family protein
PG_MUTASE (db=PatternScan db_id=PS00175 from=7 to=16 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
CARSLU_50_20
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22065..23111)
DNA (1047bp) protein (349aa)
Sensor histidine protein kinase SaeS (exoprotein expression protein S) (EC:2.7.13.3) rbh
Sensor histidine protein kinase SaeS (exoprotein expression protein S) (EC:2.7.13.3) rbh
Sensor histidine protein kinase SaeS (Exoprotein expression protein S) n=2 Tax=Staphylococcus lugdunensis RepID=D3QFK0_STALH (db=UNIREF evalue=0.0 bit_score=645.0 identity=99.71 coverage=99.4269340974212)
HAMP (db=ProfileScan db_id=PS50885 from=59 to=112 evalue=0.0 interpro_id=IPR003660 interpro_description=HAMP linker domain GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: integral to membrane (GO:0016021))
CARSLU_50_21
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23112..23792)
DNA (681bp) protein (227aa)
Response regulator SaeR (Staphylococcus exoprotein expression protein R) n=2 Tax=Staphylococcus lugdunensis RepID=D3QFK1_STALH (db=UNIREF evalue=9.0e-130 bit_score=466.0 identity=100.0 coverage=99.1189427312775)
saeR; response regulator protein
saeR; response regulator protein
no description (db=HMMSmart db_id=SM00448 from=2 to=112 evalue=3.3e-36 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARSLU_50_22
Staphylococcus pettenkoferi, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23770..24252)
DNA (483bp) protein (161aa)
saeQ; hypothetical protein
saeQ; hypothetical protein
Putative uncharacterized protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QFK2_STALH (db=UNIREF evalue=5.0e-81 bit_score=302.0 identity=100.0 coverage=91.304347826087)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
CARSLU_50_23
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24357..24797)
DNA (441bp) protein (147aa)
hypothetical protein
seg (db=Seg db_id=seg from=27 to=43)
seg (db=Seg db_id=seg from=2 to=18)
(db=HMMPfam db_id=PF10517 from=54 to=146 evalue=1.1e-16 interpro_id=IPR019545 interpro_description=DM13 domain)
CARSLU_50_24
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25457..25618
DNA (162bp) protein (54aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU83497.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
Uncharacterized protein n=5 Tax=Staphylococcus lugdunensis RepID=K8MWT8_STALU
CARSLU_50_25
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25720..26331
DNA (612bp) protein (204aa)
hypothetical protein
hypothetical protein
TerC family integral membrane protein n=1 Tax=Staphylococcus lugdunensis M23590 RepID=E6MBZ0_STALU (db=UNIREF evalue=3.0e-102 bit_score=374.0 identity=99.01 coverage=99.0196078431373)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=177)
CARSLU_50_26
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26477..26671)
DNA (195bp) protein (65aa)
membrane protein
Stage V sporulation protein AC n=2 Tax=Staphylococcus lugdunensis RepID=E6MBY9_STALU (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=100.0 coverage=96.9230769230769)
Uncharacterized protein {ECO:0000313|EMBL:EFU83495.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
CARSLU_50_27
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26905..27696
DNA (792bp) protein (264aa)
hypothetical protein
hypothetical protein
Fibronectin type III domain protein n=2 Tax=Staphylococcus lugdunensis RepID=E6MBY8_STALU (db=UNIREF evalue=3.0e-131 bit_score=471.0 identity=98.86 coverage=99.2424242424242)
seg (db=Seg db_id=seg from=223 to=236)
CARSLU_50_28
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27960..28280)
DNA (321bp) protein (107aa)
LysR family transcriptional regulator
(db=HMMPfam db_id=PF03466 from=2 to=103 evalue=3.5e-14 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=3 to=106 evalue=6.9e-11)
LysR substrate binding domain protein {ECO:0000313|EMBL:EFU83493.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
CARSLU_50_29
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28243..28866)
DNA (624bp) protein (208aa)
LysR family transcriptional regulator
seg (db=Seg db_id=seg from=170 to=186)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=112 evalue=1.9e-20)
(db=HMMPfam db_id=PF03466 from=87 to=169 evalue=4.8e-16 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
CARSLU_50_30
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29003..30040
DNA (1038bp) protein (346aa)
ABC transporter, ATP-binding protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QFK9_STALH (db=UNIREF evalue=0.0 bit_score=714.0 identity=100.0 coverage=99.4219653179191)
ABC transporter family protein
ABC transporter family protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=138 to=152 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
Displaying items 1-30 of 97 in total

View Taxonomy