Alias: CARPRO_6
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARPRO_1_1
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(1..153)
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ornithine carbamoyltransferase
Ornithine carbamoyltransferase n=69 Tax=Propionibacterium RepID=OTC_PROAC (db=UNIREF evalue=8.0e-16 bit_score=86.3 identity=80.39 coverage=98.0392156862745)
Aspartate/ornithine carbamoyltransferase (db=superfamily db_id=SSF53671 from=1 to=51 evalue=8.6e-07 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
no description (db=Gene3D db_id=G3DSA:3.40.50.1370 from=1 to=51 evalue=0.0003)
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CARPRO_1_2
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(680..2350)
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arginine--tRNA ligase
arginine--tRNA ligase
Arginyl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYR_PROAC (db=UNIREF evalue=0.0 bit_score=1035.0 identity=91.55 coverage=99.6409335727109)
seg (db=Seg db_id=seg from=538 to=549)
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CARPRO_1_3
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
2522..3343
|
2,5-diketo-D-gluconic acid reductase A
2,5-diketo-D-gluconic acid reductase A
Oxidoreductase, aldo/keto reductase family protein n=73 Tax=Propionibacterium RepID=D4HAY3_PROAS (db=UNIREF evalue=5.0e-145 bit_score=517.0 identity=91.21 coverage=99.2700729927007)
ALDOKETO_REDUCTASE_2 (db=PatternScan db_id=PS00062 from=126 to=143 evalue=0.0 interpro_id=IPR018170 interpro_description=Aldo/keto reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
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CARPRO_1_4
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(3436..4089)
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OmpA family membrane associated protein
rbh
OmpA family membrane associated protein
rbh
Conserved membrane-associated protein (OmpA family) n=69 Tax=Propionibacterium RepID=Q6A5X6_PROAC (db=UNIREF evalue=7.0e-83 bit_score=310.0 identity=80.77 coverage=83.0275229357798)
seg (db=Seg db_id=seg from=10 to=34)
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CARPRO_1_5
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(4105..6009)
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von Willebrand factor type A
rbh
von Willebrand factor type A n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XDP5_NAKMY (db=UNIREF evalue=1.0e-50 bit_score=205.0 identity=38.49 coverage=69.9212598425197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=607 to=629)
seg (db=Seg db_id=seg from=608 to=623)
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CARPRO_1_6
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(6262..7944)
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pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
rbh
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
rbh
Glucose-6-phosphate isomerase n=73 Tax=Propionibacterium RepID=G6PI_PROAC (db=UNIREF evalue=0.0 bit_score=1035.0 identity=89.98 coverage=99.4652406417112)
P_GLUCOSE_ISOMERASE_1 (db=PatternScan db_id=PS00765 from=279 to=292 evalue=0.0 interpro_id=IPR018189 interpro_description=Phosphoglucose isomerase, conserved site GO=Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347), Biological Process: gluconeogenesis (GO:0006094), Biological Process: glycolysis (GO:0006096))
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CARPRO_1_7
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
8041..9126
|
hypothetical protein
rbh
hypothetical protein
rbh
Putative uncharacterized protein n=62 Tax=Propionibacterium acnes RepID=D4HAY7_PROAS (db=UNIREF evalue=4.0e-97 bit_score=358.0 identity=61.45 coverage=97.7900552486188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=309 to=328)
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CARPRO_1_8
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9161..9838)
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putative aldolase
seg (db=Seg db_id=seg from=132 to=148)
Aldolase (db=superfamily db_id=SSF51569 from=17 to=217 evalue=4.4e-27)
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=12 to=220 evalue=1.3e-26 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824))
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CARPRO_1_9
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10016..10546
|
starvation-inducible DNA-binding protein or fine tangled pili major subunit
rbh
starvation-inducible DNA-binding protein or fine tangled pili major subunit
rbh
Ferritin-like protein n=73 Tax=Propionibacterium RepID=D4HAY9_PROAS (db=UNIREF evalue=1.0e-90 bit_score=335.0 identity=92.57 coverage=98.3050847457627)
DPS_1 (db=PatternScan db_id=PS00818 from=53 to=69 evalue=0.0 interpro_id=IPR023188 interpro_description=DNA-binding protein Dps, conserved site GO=Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722), Biological Process: oxidation-reduction process (GO:0055114))
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CARPRO_1_10
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
10804..13395
|
ski2-type helicase
rbh
ski2-type helicase
rbh
DeaD/DeaH box helicase n=74 Tax=Propionibacterium RepID=Q6A5X1_PROAC (db=UNIREF evalue=0.0 bit_score=1646.0 identity=93.05 coverage=99.7685185185185)
seg (db=Seg db_id=seg from=724 to=733)
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CARPRO_1_11
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13379..13891)
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anaerobic ribonucleoside-triphosphate reductase activating protein
rbh
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=4 Tax=Propionibacterium RepID=E4AFM7_PROAA (db=UNIREF evalue=2.0e-74 bit_score=281.0 identity=82.72 coverage=94.1520467836257)
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=14 to=35 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
Anaerobic ribonucleoside-triphosphate reductase class III, small subunit (db=HMMPIR db_id=PIRSF000368 from=1 to=165 evalue=6.6e-51 interpro_id=IPR012837 interpro_description=Ribonucleoside-triphosphate reductase activating, anaerobic GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: [formate-C-acetyltransferase]-activating enzyme activity (GO:0043365), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
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CARPRO_1_12
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13905..16241)
|
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
rbh
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
rbh
Anaerobic ribonucleoside-triphosphate reductase n=74 Tax=Propionibacterium RepID=D4HAZ2_PROAS (db=UNIREF evalue=0.0 bit_score=1358.0 identity=90.9 coverage=99.7432605905006)
seg (db=Seg db_id=seg from=315 to=329)
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CARPRO_1_13
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16702..17163
|
Raf-like protein
rbh
Raf-like protein n=73 Tax=Propionibacterium RepID=D4HAZ3_PROAS (db=UNIREF evalue=5.0e-78 bit_score=292.0 identity=91.5 coverage=98.7012987012987)
no description (db=Gene3D db_id=G3DSA:3.90.280.10 from=1 to=150 evalue=1.8e-47 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
PEBP-like (db=superfamily db_id=SSF49777 from=1 to=151 evalue=2.4e-47 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
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CARPRO_1_14
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17216..18454
|
putative serine esterase cutinase
putative serine esterase cutinase
Cutinase n=4 Tax=Propionibacterium RepID=F3P3Q3_9ACTO (db=UNIREF evalue=9.0e-91 bit_score=337.0 identity=82.65 coverage=52.7845036319613)
G3DSA:3.40.50.1820 (db=Gene3D db_id=G3DSA:3.40.50.1820 from=288 to=351 evalue=8.49999999999995e-29)
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CARPRO_1_15
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(18459..19157)
|
hypothetical protein
rbh
seg (db=Seg db_id=seg from=4 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=144)
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CARPRO_1_16
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19530..19628
|
19530..19628 + ( gc_cont=0.616)
Phage integrase
Phage integrase {ECO:0000313|EMBL:AFV89894.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionic
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CARPRO_1_17
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19677..20027
|
transposase
Transposase n=1 Tax=Arthrobacter phenanthrenivorans Sphe3 RepID=F0M3P7_ARTPP (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=62.5 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=78 to=91)
coiled-coil (db=Coil db_id=coil from=72 to=107 evalue=NA)
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CARPRO_1_18
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20024..20932
|
transposase
rbh
transposase
rbh
Putative transposase n=1 Tax=Terrabacter sp. DBF63 RepID=Q83ZE4_9MICO (db=UNIREF evalue=1.0e-112 bit_score=409.0 identity=72.19 coverage=98.019801980198)
seg (db=Seg db_id=seg from=35 to=53)
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CARPRO_1_19
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21017..21427
|
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY78187.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9V8K9_9ACTO
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CARPRO_1_20
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21708..22151
|
seg (db=Seg db_id=seg from=134 to=147)
seg (db=Seg db_id=seg from=29 to=41)
Uncharacterized protein {ECO:0000313|EMBL:AFV89680.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidip
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CARPRO_1_21
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(22094..23107)
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LacI family transcription regulator
LacI family transcription regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W683_9ACTO (db=UNIREF evalue=6.0e-85 bit_score=318.0 identity=57.91 coverage=91.7159763313609)
HTH_LACI_2 (db=ProfileScan db_id=PS50932 from=8 to=62 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=10 to=28 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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CARPRO_1_22
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(23233..24744)
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L-arabinose isomerase (EC:5.3.1.4)
rbh
L-arabinose isomerase (EC:5.3.1.4)
rbh
L-arabinose isomerase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W673_9ACTO (db=UNIREF evalue=0.0 bit_score=782.0 identity=73.35 coverage=98.8095238095238)
L-arabinose isomerase (db=HMMPIR db_id=PIRSF001478 from=2 to=501 evalue=0.0 interpro_id=IPR003762 interpro_description=L-arabinose isomerase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: L-arabinose isomerase activity (GO:0008733))
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CARPRO_1_23
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24804..25520)
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L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Amycolicicoccus subflavus DQS3-9A1 RepID=F6EQZ4_9MYCO (db=UNIREF evalue=7.0e-100 bit_score=367.0 identity=76.82 coverage=97.071129707113)
Aldolase_II (db=HMMSmart db_id=SM01007 from=21 to=204 evalue=1.49999648196323e-63 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
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CARPRO_1_24
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25862..27259
|
Major facilitator family protein
Major facilitator family protein
Major facilitator family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQG5_9FIRM (db=UNIREF evalue=3.0e-180 bit_score=635.0 identity=74.4 coverage=98.4978540772532)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
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CARPRO_1_25
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27365..27562)
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Transcriptional regulator, LacI family protein
G3DSA:3.40.50.2300 (db=Gene3D db_id=G3DSA:3.40.50.2300 from=2 to=61 evalue=5.20000000000001e-12)
SSF53822 (db=superfamily db_id=SSF53822 from=2 to=61 evalue=2.79999889404114e-08)
LacI-type transcriptional regulator n=2 Tax=Propionibacterium avidum RepID=G4CW70_9ACTO
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CARPRO_1_26
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27775..28830
|
Transcriptional regulator, LacI family protein
Transcriptional regulator, LacI family protein
Transcriptional regulator, LacI family n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H0K0_CELFA (db=UNIREF evalue=2.0e-89 bit_score=333.0 identity=59.15 coverage=92.0454545454545)
seg (db=Seg db_id=seg from=89 to=100)
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CARPRO_1_27
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28844..29746)
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ABC-type sugar transport system, permease component
rbh
ABC-type sugar transport system, permease component
rbh
ABC-type sugar transport system, permease component n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA34_BRAFD (db=UNIREF evalue=3.0e-89 bit_score=332.0 identity=72.91 coverage=83.0564784053156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
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CARPRO_1_28
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29748..30713)
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Permease component of ABC-type sugar transporter
Permease component of ABC-type sugar transporter
Permease component of ABC-type sugar transporter n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA35_BRAFD (db=UNIREF evalue=8.0e-112 bit_score=407.0 identity=71.83 coverage=87.888198757764)
ABC_TM1 (db=ProfileScan db_id=PS50928 from=96 to=309 evalue=0.0 interpro_id=IPR000515 interpro_description=Binding-protein-dependent transport systems inner membrane component GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
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CARPRO_1_29
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30738..32075)
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ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA36_BRAFD (db=UNIREF evalue=3.0e-154 bit_score=549.0 identity=63.4 coverage=93.2735426008969)
seg (db=Seg db_id=seg from=12 to=27)
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CARPRO_1_30
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
32398..33936
|
alpha-L-arabinofuranosidase
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H0J4_CELFA (db=UNIREF evalue=0.0 bit_score=800.0 identity=76.22 coverage=99.6101364522417)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=17 to=388 evalue=6.6e-113 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
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