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CARPRO_1

Alias: CARPRO_6

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_1_1
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
ornithine carbamoyltransferase
Ornithine carbamoyltransferase n=69 Tax=Propionibacterium RepID=OTC_PROAC (db=UNIREF evalue=8.0e-16 bit_score=86.3 identity=80.39 coverage=98.0392156862745)
Aspartate/ornithine carbamoyltransferase (db=superfamily db_id=SSF53671 from=1 to=51 evalue=8.6e-07 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
no description (db=Gene3D db_id=G3DSA:3.40.50.1370 from=1 to=51 evalue=0.0003)
CARPRO_1_2
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(680..2350)
DNA (1671bp) protein (557aa)
arginine--tRNA ligase
arginine--tRNA ligase
Arginyl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYR_PROAC (db=UNIREF evalue=0.0 bit_score=1035.0 identity=91.55 coverage=99.6409335727109)
seg (db=Seg db_id=seg from=538 to=549)
CARPRO_1_3
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2522..3343
DNA (822bp) protein (274aa)
2,5-diketo-D-gluconic acid reductase A
2,5-diketo-D-gluconic acid reductase A
Oxidoreductase, aldo/keto reductase family protein n=73 Tax=Propionibacterium RepID=D4HAY3_PROAS (db=UNIREF evalue=5.0e-145 bit_score=517.0 identity=91.21 coverage=99.2700729927007)
ALDOKETO_REDUCTASE_2 (db=PatternScan db_id=PS00062 from=126 to=143 evalue=0.0 interpro_id=IPR018170 interpro_description=Aldo/keto reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
CARPRO_1_4
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3436..4089)
DNA (654bp) protein (218aa)
OmpA family membrane associated protein rbh
OmpA family membrane associated protein rbh
Conserved membrane-associated protein (OmpA family) n=69 Tax=Propionibacterium RepID=Q6A5X6_PROAC (db=UNIREF evalue=7.0e-83 bit_score=310.0 identity=80.77 coverage=83.0275229357798)
seg (db=Seg db_id=seg from=10 to=34)
CARPRO_1_5
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4105..6009)
DNA (1905bp) protein (635aa)
von Willebrand factor type A rbh
von Willebrand factor type A n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XDP5_NAKMY (db=UNIREF evalue=1.0e-50 bit_score=205.0 identity=38.49 coverage=69.9212598425197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=607 to=629)
seg (db=Seg db_id=seg from=608 to=623)
CARPRO_1_6
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6262..7944)
DNA (1683bp) protein (561aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
Glucose-6-phosphate isomerase n=73 Tax=Propionibacterium RepID=G6PI_PROAC (db=UNIREF evalue=0.0 bit_score=1035.0 identity=89.98 coverage=99.4652406417112)
P_GLUCOSE_ISOMERASE_1 (db=PatternScan db_id=PS00765 from=279 to=292 evalue=0.0 interpro_id=IPR018189 interpro_description=Phosphoglucose isomerase, conserved site GO=Molecular Function: glucose-6-phosphate isomerase activity (GO:0004347), Biological Process: gluconeogenesis (GO:0006094), Biological Process: glycolysis (GO:0006096))
CARPRO_1_7
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8041..9126
DNA (1086bp) protein (362aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=62 Tax=Propionibacterium acnes RepID=D4HAY7_PROAS (db=UNIREF evalue=4.0e-97 bit_score=358.0 identity=61.45 coverage=97.7900552486188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=309 to=328)
CARPRO_1_8
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9161..9838)
DNA (678bp) protein (226aa)
putative aldolase
seg (db=Seg db_id=seg from=132 to=148)
Aldolase (db=superfamily db_id=SSF51569 from=17 to=217 evalue=4.4e-27)
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=12 to=220 evalue=1.3e-26 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824))
CARPRO_1_9
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10016..10546
DNA (531bp) protein (177aa)
starvation-inducible DNA-binding protein or fine tangled pili major subunit rbh
starvation-inducible DNA-binding protein or fine tangled pili major subunit rbh
Ferritin-like protein n=73 Tax=Propionibacterium RepID=D4HAY9_PROAS (db=UNIREF evalue=1.0e-90 bit_score=335.0 identity=92.57 coverage=98.3050847457627)
DPS_1 (db=PatternScan db_id=PS00818 from=53 to=69 evalue=0.0 interpro_id=IPR023188 interpro_description=DNA-binding protein Dps, conserved site GO=Molecular Function: oxidoreductase activity, oxidizing metal ions (GO:0016722), Biological Process: oxidation-reduction process (GO:0055114))
CARPRO_1_10
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10804..13395
DNA (2592bp) protein (864aa)
ski2-type helicase rbh
ski2-type helicase rbh
DeaD/DeaH box helicase n=74 Tax=Propionibacterium RepID=Q6A5X1_PROAC (db=UNIREF evalue=0.0 bit_score=1646.0 identity=93.05 coverage=99.7685185185185)
seg (db=Seg db_id=seg from=724 to=733)
CARPRO_1_11
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13379..13891)
DNA (513bp) protein (171aa)
anaerobic ribonucleoside-triphosphate reductase activating protein rbh
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=4 Tax=Propionibacterium RepID=E4AFM7_PROAA (db=UNIREF evalue=2.0e-74 bit_score=281.0 identity=82.72 coverage=94.1520467836257)
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=14 to=35 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
Anaerobic ribonucleoside-triphosphate reductase class III, small subunit (db=HMMPIR db_id=PIRSF000368 from=1 to=165 evalue=6.6e-51 interpro_id=IPR012837 interpro_description=Ribonucleoside-triphosphate reductase activating, anaerobic GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: [formate-C-acetyltransferase]-activating enzyme activity (GO:0043365), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
CARPRO_1_12
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13905..16241)
DNA (2337bp) protein (779aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2) rbh
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2) rbh
Anaerobic ribonucleoside-triphosphate reductase n=74 Tax=Propionibacterium RepID=D4HAZ2_PROAS (db=UNIREF evalue=0.0 bit_score=1358.0 identity=90.9 coverage=99.7432605905006)
seg (db=Seg db_id=seg from=315 to=329)
CARPRO_1_13
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16702..17163
DNA (462bp) protein (154aa)
Raf-like protein rbh
Raf-like protein n=73 Tax=Propionibacterium RepID=D4HAZ3_PROAS (db=UNIREF evalue=5.0e-78 bit_score=292.0 identity=91.5 coverage=98.7012987012987)
no description (db=Gene3D db_id=G3DSA:3.90.280.10 from=1 to=150 evalue=1.8e-47 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
PEBP-like (db=superfamily db_id=SSF49777 from=1 to=151 evalue=2.4e-47 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
CARPRO_1_14
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17216..18454
DNA (1239bp) protein (413aa)
putative serine esterase cutinase
putative serine esterase cutinase
Cutinase n=4 Tax=Propionibacterium RepID=F3P3Q3_9ACTO (db=UNIREF evalue=9.0e-91 bit_score=337.0 identity=82.65 coverage=52.7845036319613)
G3DSA:3.40.50.1820 (db=Gene3D db_id=G3DSA:3.40.50.1820 from=288 to=351 evalue=8.49999999999995e-29)
CARPRO_1_15
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18459..19157)
DNA (699bp) protein (233aa)
hypothetical protein rbh
seg (db=Seg db_id=seg from=4 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=144)
CARPRO_1_16
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19530..19628
DNA (99bp) protein (33aa)
19530..19628 + ( gc_cont=0.616)
Phage integrase
Phage integrase {ECO:0000313|EMBL:AFV89894.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionic
CARPRO_1_17
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19677..20027
DNA (351bp) protein (117aa)
transposase
Transposase n=1 Tax=Arthrobacter phenanthrenivorans Sphe3 RepID=F0M3P7_ARTPP (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=62.5 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=78 to=91)
coiled-coil (db=Coil db_id=coil from=72 to=107 evalue=NA)
CARPRO_1_18
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20024..20932
DNA (909bp) protein (303aa)
transposase rbh
transposase rbh
Putative transposase n=1 Tax=Terrabacter sp. DBF63 RepID=Q83ZE4_9MICO (db=UNIREF evalue=1.0e-112 bit_score=409.0 identity=72.19 coverage=98.019801980198)
seg (db=Seg db_id=seg from=35 to=53)
CARPRO_1_19
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21017..21427
DNA (411bp) protein (137aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY78187.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9V8K9_9ACTO
CARPRO_1_20
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21708..22151
DNA (444bp) protein (148aa)
seg (db=Seg db_id=seg from=134 to=147)
seg (db=Seg db_id=seg from=29 to=41)
Uncharacterized protein {ECO:0000313|EMBL:AFV89680.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidip
CARPRO_1_21
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22094..23107)
DNA (1014bp) protein (338aa)
LacI family transcription regulator
LacI family transcription regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W683_9ACTO (db=UNIREF evalue=6.0e-85 bit_score=318.0 identity=57.91 coverage=91.7159763313609)
HTH_LACI_2 (db=ProfileScan db_id=PS50932 from=8 to=62 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=10 to=28 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARPRO_1_22
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23233..24744)
DNA (1512bp) protein (504aa)
L-arabinose isomerase (EC:5.3.1.4) rbh
L-arabinose isomerase (EC:5.3.1.4) rbh
L-arabinose isomerase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W673_9ACTO (db=UNIREF evalue=0.0 bit_score=782.0 identity=73.35 coverage=98.8095238095238)
L-arabinose isomerase (db=HMMPIR db_id=PIRSF001478 from=2 to=501 evalue=0.0 interpro_id=IPR003762 interpro_description=L-arabinose isomerase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: L-arabinose isomerase activity (GO:0008733))
CARPRO_1_23
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24804..25520)
DNA (717bp) protein (239aa)
L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Amycolicicoccus subflavus DQS3-9A1 RepID=F6EQZ4_9MYCO (db=UNIREF evalue=7.0e-100 bit_score=367.0 identity=76.82 coverage=97.071129707113)
Aldolase_II (db=HMMSmart db_id=SM01007 from=21 to=204 evalue=1.49999648196323e-63 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
CARPRO_1_24
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25862..27259
DNA (1398bp) protein (466aa)
Major facilitator family protein
Major facilitator family protein
Major facilitator family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQG5_9FIRM (db=UNIREF evalue=3.0e-180 bit_score=635.0 identity=74.4 coverage=98.4978540772532)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
CARPRO_1_25
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27365..27562)
DNA (198bp) protein (66aa)
Transcriptional regulator, LacI family protein
G3DSA:3.40.50.2300 (db=Gene3D db_id=G3DSA:3.40.50.2300 from=2 to=61 evalue=5.20000000000001e-12)
SSF53822 (db=superfamily db_id=SSF53822 from=2 to=61 evalue=2.79999889404114e-08)
LacI-type transcriptional regulator n=2 Tax=Propionibacterium avidum RepID=G4CW70_9ACTO
CARPRO_1_26
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27775..28830
DNA (1056bp) protein (352aa)
Transcriptional regulator, LacI family protein
Transcriptional regulator, LacI family protein
Transcriptional regulator, LacI family n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H0K0_CELFA (db=UNIREF evalue=2.0e-89 bit_score=333.0 identity=59.15 coverage=92.0454545454545)
seg (db=Seg db_id=seg from=89 to=100)
CARPRO_1_27
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28844..29746)
DNA (903bp) protein (301aa)
ABC-type sugar transport system, permease component rbh
ABC-type sugar transport system, permease component rbh
ABC-type sugar transport system, permease component n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA34_BRAFD (db=UNIREF evalue=3.0e-89 bit_score=332.0 identity=72.91 coverage=83.0564784053156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
CARPRO_1_28
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29748..30713)
DNA (966bp) protein (322aa)
Permease component of ABC-type sugar transporter
Permease component of ABC-type sugar transporter
Permease component of ABC-type sugar transporter n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA35_BRAFD (db=UNIREF evalue=8.0e-112 bit_score=407.0 identity=71.83 coverage=87.888198757764)
ABC_TM1 (db=ProfileScan db_id=PS50928 from=96 to=309 evalue=0.0 interpro_id=IPR000515 interpro_description=Binding-protein-dependent transport systems inner membrane component GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
CARPRO_1_29
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30738..32075)
DNA (1338bp) protein (446aa)
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA36_BRAFD (db=UNIREF evalue=3.0e-154 bit_score=549.0 identity=63.4 coverage=93.2735426008969)
seg (db=Seg db_id=seg from=12 to=27)
CARPRO_1_30
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32398..33936
DNA (1539bp) protein (513aa)
alpha-L-arabinofuranosidase
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H0J4_CELFA (db=UNIREF evalue=0.0 bit_score=800.0 identity=76.22 coverage=99.6101364522417)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=17 to=388 evalue=6.6e-113 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
Displaying items 1-30 of 234 in total

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