ggKbase home page

CARPRO_11

Alias: CARPRO_17

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_11_1
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(152..1351)
DNA (1200bp) protein (400aa)
pyrophosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
pyrophosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Pyrophosphate--fructose-6-phosphate 1-phosphotransferase n=72 Tax=Propionibacterium RepID=D4HDP9_PROAS (db=UNIREF evalue=0.0 bit_score=753.0 identity=95.49 coverage=99.5)
PPi-PFK_SMc01852 (db=HMMPIR db_id=PIRSF036484 from=1 to=399 evalue=0.0 interpro_id=IPR011405 interpro_description=Pyrophosphate-dependent phosphofructokinase, SMc01852)
CARPRO_11_2
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1580..1933
DNA (354bp) protein (118aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=14)
seg (db=Seg db_id=seg from=20 to=34)
Uncharacterized protein {ECO:0000313|EMBL:ERS37051.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_3
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1971..2591
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein n=73 Tax=Propionibacterium RepID=D4HDQ1_PROAS (db=UNIREF evalue=1.0e-107 bit_score=392.0 identity=89.81 coverage=99.0338164251208)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=1 to=206 evalue=1.2e-61 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
CARPRO_11_4
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2643..3329
DNA (687bp) protein (229aa)
MTA/SAH nucleosidase
MTA/SAH nucleosidase
MTA/SAH nucleosidase n=4 Tax=Propionibacterium RepID=E4ADB3_PROAA (db=UNIREF evalue=3.0e-107 bit_score=391.0 identity=89.24 coverage=96.943231441048)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=2 to=228 evalue=1.3e-58)
CARPRO_11_5
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3359..4270)
DNA (912bp) protein (304aa)
hypothetical protein rbh
hypothetical protein rbh
Diacylglycerol kinase catalytic domain (Presumed) n=68 Tax=Propionibacterium RepID=D4HDQ3_PROAS (db=UNIREF evalue=4.0e-144 bit_score=514.0 identity=83.83 coverage=99.3421052631579)
BMRU PROTEIN (db=HMMPanther db_id=PTHR12358:SF4 from=1 to=270 evalue=1.1e-37)
CARPRO_11_6
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4315..4965)
DNA (651bp) protein (217aa)
hypothetical protein rbh
seg (db=Seg db_id=seg from=23 to=36)
seg (db=Seg db_id=seg from=40 to=52)
no description (db=Gene3D db_id=G3DSA:3.30.230.30 from=3 to=138 evalue=5.8e-37 interpro_id=IPR001498 interpro_description=Impact, N-terminal)
CARPRO_11_7
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4962..6188)
DNA (1227bp) protein (409aa)
hypothetical protein
hypothetical protein
Conserved membrane spanning protein n=73 Tax=Propionibacterium RepID=Q6A8S3_PROAC (db=UNIREF evalue=0.0 bit_score=735.0 identity=87.99 coverage=99.5110024449878)
seg (db=Seg db_id=seg from=33 to=44)
CARPRO_11_8
unknown

Not on your lists

6471..6821
DNA (351bp) protein (117aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=33 to=52)
CARPRO_11_9
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6772..8259)
DNA (1488bp) protein (496aa)
DnaK family protein rbh
DnaK family protein rbh
Conserved domain protein n=4 Tax=Propionibacterium RepID=E4ADA9_PROAA (db=UNIREF evalue=8.0e-139 bit_score=497.0 identity=73.15 coverage=72.7822580645161)
seg (db=Seg db_id=seg from=477 to=493)
CARPRO_11_10
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8295..9314)
DNA (1020bp) protein (340aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=73 Tax=Propionibacterium RepID=D4HDQ7_PROAS (db=UNIREF evalue=3.0e-155 bit_score=551.0 identity=92.49 coverage=85.8823529411765)
UCP028754 (db=HMMPIR db_id=PIRSF028754 from=1 to=302 evalue=7.6999848053369e-51 interpro_id=IPR008492 interpro_description=Protein of unknown function DUF774)
CARPRO_11_11
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9429..10205
DNA (777bp) protein (259aa)
peptidyl-prolyl cis-trans isomerase B
Peptidyl-prolyl cis-trans isomerase family protein n=7 Tax=Propionibacterium RepID=F5TK50_9ACTO (db=UNIREF evalue=9.0e-102 bit_score=373.0 identity=78.68 coverage=99.2277992277992)
seg (db=Seg db_id=seg from=56 to=75)
seg (db=Seg db_id=seg from=41 to=53)
CARPRO_11_12
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10215..11027)
DNA (813bp) protein (271aa)
hydrolase, alpha/beta domain protein rbh
hydrolase, alpha/beta domain protein rbh
Hydrolase, alpha/beta fold family protein n=4 Tax=Propionibacterium RepID=E4ADA6_PROAA (db=UNIREF evalue=2.0e-133 bit_score=478.0 identity=84.64 coverage=98.1549815498155)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=4 to=270 evalue=1.3e-43)
CARPRO_11_13
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11291..12136
DNA (846bp) protein (282aa)
hypothetical protein
hypothetical protein
UPF0286 protein PPA1102 n=63 Tax=Propionibacterium acnes RepID=Q6A8R7_PROAC (db=UNIREF evalue=9.0e-113 bit_score=410.0 identity=85.21 coverage=90.0709219858156)
seg (db=Seg db_id=seg from=107 to=129)
CARPRO_11_14
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12250..13593)
DNA (1344bp) protein (448aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=69 Tax=Propionibacterium RepID=D4HDR1_PROAS (db=UNIREF evalue=0.0 bit_score=649.0 identity=75.97 coverage=99.1071428571429)
seg (db=Seg db_id=seg from=225 to=238)
CARPRO_11_15
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13731..14189)
DNA (459bp) protein (153aa)
methylmalonyl-CoA epimerase
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase n=73 Tax=Propionibacterium RepID=D4HDR2_PROAS (db=UNIREF evalue=3.0e-80 bit_score=300.0 identity=93.42 coverage=98.6928104575163)
metmalonyl_epim: methylmalonyl-CoA ep (db=HMMTigr db_id=TIGR03081 from=11 to=142 evalue=1.7e-45 interpro_id=IPR017515 interpro_description=Methylmalonyl-CoA epimerase)
CARPRO_11_16
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14435..14593
DNA (159bp) protein (53aa)
14435..14593 + ( gc_cont=0.572)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS24291.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_11_17
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14596..15123
DNA (528bp) protein (176aa)
Membrane-flanked domain protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
(db=HMMPfam db_id=PF03703 from=85 to=149 evalue=1.2e-11 interpro_id=IPR005182 interpro_description=Domain of unknown function DUF304l)
CARPRO_11_18
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15213..16844)
DNA (1632bp) protein (544aa)
phosphoglucomutase (EC:5.4.2.2)
phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=73 Tax=Propionibacterium RepID=D4HDR3_PROAS (db=UNIREF evalue=0.0 bit_score=1035.0 identity=93.19 coverage=99.6323529411765)
PGM_PMM (db=PatternScan db_id=PS00710 from=140 to=149 evalue=0.0 interpro_id=IPR016066 interpro_description=Alpha-D-phosphohexomutase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287))
CARPRO_11_19
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16957..17895
DNA (939bp) protein (313aa)
putative thioredoxin
putative thioredoxin
Thioredoxin n=73 Tax=Propionibacterium RepID=D4HDR4_PROAS (db=UNIREF evalue=3.0e-121 bit_score=438.0 identity=85.05 coverage=95.5271565495208)
Thioredoxin_fold (db=Gene3D db_id=G3DSA:3.40.30.10 from=46 to=155 evalue=1.99999999999999e-19 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
CARPRO_11_20
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18004..18747
DNA (744bp) protein (248aa)
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
Beta-phosphoglucomutase family hydrolase n=4 Tax=Propionibacterium RepID=E4AD96_PROAA (db=UNIREF evalue=4.0e-104 bit_score=380.0 identity=87.45 coverage=99.1935483870968)
PGMB-YQAB-SF (db=HMMTigr db_id=TIGR02009 from=14 to=213 evalue=5.59999999999999e-49 interpro_id=IPR010976 interpro_description=Beta-phosphoglucomutase hydrolase)
CARPRO_11_21
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18744..21257
DNA (2514bp) protein (838aa)
trehalose phosphorylase rbh
trehalose phosphorylase rbh
Glycosyl hydrolase family 65 central catalytic domain protein n=73 Tax=Propionibacterium RepID=D4HDR6_PROAS (db=UNIREF evalue=0.0 bit_score=1597.0 identity=94.13 coverage=99.5226730310263)
seg (db=Seg db_id=seg from=510 to=522)
CARPRO_11_22
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21362..23443)
DNA (2082bp) protein (694aa)
phosphoenolpyruvate sugar phosphotransferase rbh
phosphoenolpyruvate sugar phosphotransferase rbh
Phosphotransferase system, EIIB n=73 Tax=Propionibacterium RepID=D4HDR7_PROAS (db=UNIREF evalue=0.0 bit_score=1092.0 identity=89.18 coverage=97.9827089337176)
seg (db=Seg db_id=seg from=499 to=519)
CARPRO_11_23
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23540..24334)
DNA (795bp) protein (265aa)
NUDIX family hydrolase
NUDIX family hydrolase
Hydrolase, NUDIX family n=67 Tax=Propionibacterium RepID=D4HDR8_PROAS (db=UNIREF evalue=9.0e-123 bit_score=443.0 identity=83.59 coverage=98.4905660377358)
Nudix (db=superfamily db_id=SSF55811 from=91 to=251 evalue=1.3e-23 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
CARPRO_11_24
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26429..27727)
DNA (1299bp) protein (433aa)
hypothetical protein rbh
hypothetical protein rbh
Trehalose synthase-fused maltokinase n=4 Tax=Propionibacterium RepID=F3P0R5_9ACTO (db=UNIREF evalue=0.0 bit_score=684.0 identity=78.01 coverage=99.3071593533487)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=121 to=401 evalue=1.6e-12 interpro_id=IPR011009 interpro_description=Protein kinase-like domain GO=Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
CARPRO_11_25
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27724..29496)
DNA (1773bp) protein (591aa)
trehalose synthase rbh
trehalose synthase rbh
Trehalose synthase n=75 Tax=Propionibacterium RepID=Q6A8Q5_PROAC (db=UNIREF evalue=0.0 bit_score=1136.0 identity=93.04 coverage=99.492385786802)
treS_nterm: trehalose synthase (db=HMMTigr db_id=TIGR02456 from=48 to=585 evalue=0.0 interpro_id=IPR012810 interpro_description=Trehalose synthase/alpha-amylase, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
CARPRO_11_26
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29493..31616)
DNA (2124bp) protein (708aa)
putative glucanase GlgE
putative glucanase GlgE
Alpha amylase, catalytic domain protein n=26 Tax=Propionibacterium RepID=D1YCD6_PROAA (db=UNIREF evalue=0.0 bit_score=1236.0 identity=90.03 coverage=93.361581920904)
seg (db=Seg db_id=seg from=635 to=643)
CARPRO_11_27
Propionibacterium sp. KPL2000, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31933..34023)
DNA (2091bp) protein (697aa)
glycogen operon protein GlgX rbh
glycogen operon protein GlgX rbh
Glycogen debranching enzyme GlgX n=73 Tax=Propionibacterium RepID=D4HDS3_PROAS (db=UNIREF evalue=0.0 bit_score=1305.0 identity=90.43 coverage=98.8522238163558)
glgX_debranch: glycogen debranching enz (db=HMMTigr db_id=TIGR02100 from=8 to=689 evalue=1.1e-240 interpro_id=IPR011837 interpro_description=Glycogen debranching enzyme GO=Molecular Function: glycogen debranching enzyme activity (GO:0004133), Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: glycogen catabolic process (GO:0005980))
CARPRO_11_28
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34180..35325
DNA (1146bp) protein (382aa)
class V aminotransferase rbh
class V aminotransferase rbh
Aminotransferase, class V n=68 Tax=Propionibacterium RepID=D4HDS4_PROAS (db=UNIREF evalue=1.0e-147 bit_score=526.0 identity=77.69 coverage=98.9528795811518)
seg (db=Seg db_id=seg from=243 to=254)
CARPRO_11_29
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35417..36517
DNA (1101bp) protein (367aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) rbh
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) rbh
tRNA-specific 2-thiouridylase mnmA n=73 Tax=Propionibacterium RepID=MNMA_PROAC (db=UNIREF evalue=0.0 bit_score=664.0 identity=90.44 coverage=99.4550408719346)
seg (db=Seg db_id=seg from=14 to=23)
CARPRO_11_30
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36514..37497
DNA (984bp) protein (328aa)
methionine synthase, vitamin-B12 independent rbh
methionine synthase, vitamin-B12 independent rbh
Methionine synthase, vitamin-B12 independent n=4 Tax=Propionibacterium RepID=E4ABZ5_PROAA (db=UNIREF evalue=6.0e-139 bit_score=497.0 identity=77.3 coverage=99.0853658536585)
coiled-coil (db=Coil db_id=coil from=77 to=98 evalue=NA)
Displaying items 1-30 of 292 in total

View Taxonomy