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CARPRO_14

Alias: CARPRO_3

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARPRO_14_1
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1098)
DNA (1098bp) protein (366aa)
oxalate/formate-specific permease rbh
oxalate/formate-specific permease rbh
Transporter, major facilitator family protein n=69 Tax=Propionibacterium RepID=D4HDP8_PROAS (db=UNIREF evalue=6.0e-146 bit_score=520.0 identity=84.15 coverage=99.7267759562842)
transmembrane_regions (db=TMHMM db_id=tmhmm from=287 to=309)
CARPRO_14_2
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1309..2529)
DNA (1221bp) protein (407aa)
putative tRNA-processing ribonuclease rbh
putative tRNA-processing ribonuclease rbh
Putative ribonuclease n=69 Tax=Propionibacterium RepID=D4HDP7_PROAS (db=UNIREF evalue=5.0e-128 bit_score=461.0 identity=77.27 coverage=99.5085995085995)
seg (db=Seg db_id=seg from=381 to=398)
CARPRO_14_3
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2639..3226)
DNA (588bp) protein (196aa)
hypothetical protein
hypothetical protein
Predicted transcriptional regulator n=73 Tax=Propionibacterium RepID=Q6A8T2_PROAC (db=UNIREF evalue=3.0e-102 bit_score=374.0 identity=94.36 coverage=98.9795918367347)
no description (db=HMMSmart db_id=SM00422 from=39 to=111 evalue=8.2e-18 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARPRO_14_4
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3410..3889)
DNA (480bp) protein (160aa)
hypothetical protein
DUF151 (db=superfamily db_id=SSF103256 from=1 to=137 evalue=1.10000150671643e-36 interpro_id=IPR003729 interpro_description=Domain of unknown function DUF151)
DUF151 (db=HMMPfam db_id=PF02577 from=5 to=129 evalue=2.50000000000001e-34 interpro_id=IPR003729 interpro_description=Domain of unknown function DUF151)
Uncharacterized protein {ECO:0000313|EMBL:ERS66440.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_14_5
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3969..4679)
DNA (711bp) protein (237aa)
merR family transcriptional regulator
merR family transcriptional regulator
Transcriptional regulator, MerR family n=73 Tax=Propionibacterium RepID=D4HDP4_PROAS (db=UNIREF evalue=7.0e-116 bit_score=420.0 identity=93.25 coverage=99.1561181434599)
HTH_MERR_2 (db=ProfileScan db_id=PS50937 from=5 to=79 evalue=0.0 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CARPRO_14_6
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4679..5260)
DNA (582bp) protein (194aa)
FHA domain-containing protein
FHA domain-containing protein
FHA domain protein n=73 Tax=Propionibacterium RepID=D4HDP3_PROAS (db=UNIREF evalue=5.0e-93 bit_score=343.0 identity=92.23 coverage=98.4536082474227)
FHA_DOMAIN (db=ProfileScan db_id=PS50006 from=107 to=157 evalue=0.0 interpro_id=IPR000253 interpro_description=Forkhead-associated (FHA) domain GO=Molecular Function: protein binding (GO:0005515))
CARPRO_14_7
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5269..5649)
DNA (381bp) protein (127aa)
glycine cleavage system H protein
G3DSA:2.40.50.100 (db=Gene3D db_id=G3DSA:2.40.50.100 from=1 to=124 evalue=1.69999999999999e-29)
Hybrid_motif (db=superfamily db_id=SSF51230 from=3 to=126 evalue=7.60000011115812e-26 interpro_id=IPR011053 interpro_description=Single hybrid motif)
GCV_H (db=HMMPfam db_id=PF01597 from=11 to=123 evalue=5.30000000000001e-21 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
CARPRO_14_8
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5726..6478)
DNA (753bp) protein (251aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=73 Tax=Propionibacterium RepID=D4HDP1_PROAS (db=UNIREF evalue=1.0e-126 bit_score=456.0 identity=86.0 coverage=99.203187250996)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
CARPRO_14_9
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6471..6803)
DNA (333bp) protein (111aa)
small basic protein
Small basic protein n=73 Tax=Propionibacterium RepID=D4HDP0_PROAS (db=UNIREF evalue=4.0e-45 bit_score=183.0 identity=100.0 coverage=82.8828828828829)
seg (db=Seg db_id=seg from=4 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
CARPRO_14_10
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6846..7616)
DNA (771bp) protein (257aa)
membrane associated protein rbh
membrane associated protein rbh
Conserved membrane associated protein n=69 Tax=Propionibacterium RepID=Q6A8T9_PROAC (db=UNIREF evalue=3.0e-91 bit_score=338.0 identity=83.98 coverage=98.8326848249027)
seg (db=Seg db_id=seg from=40 to=58)
CARPRO_14_11
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7613..8266)
DNA (654bp) protein (218aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=73 Tax=Propionibacterium RepID=F1TNZ3_PROAA (db=UNIREF evalue=5.0e-105 bit_score=383.0 identity=86.64 coverage=99.0825688073395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
CARPRO_14_12
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8312..8950)
DNA (639bp) protein (213aa)
CDP-alcohol phosphatidyltransferase rbh
CDP-alcohol phosphatidyltransferase rbh
CDP-alcohol phosphatidyltransferase n=73 Tax=Propionibacterium RepID=D4HDN7_PROAS (db=UNIREF evalue=3.0e-104 bit_score=381.0 identity=87.92 coverage=96.7136150234742)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=200)
CARPRO_14_13
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8928..9488)
DNA (561bp) protein (187aa)
HIT family protein
HIT family protein
Putative HIT family protein n=1 Tax=Propionibacterium acnes KPA171202 RepID=Q6A8U2_PROAC (db=UNIREF evalue=4.0e-94 bit_score=347.0 identity=93.01 coverage=98.9304812834225)
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=63 to=186 evalue=2.3e-22 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
CARPRO_14_14
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9481..11535)
DNA (2055bp) protein (685aa)
threonine--tRNA ligase rbh
threonine--tRNA ligase rbh
Threonyl-tRNA synthetase n=73 Tax=Propionibacterium RepID=SYT_PROAC (db=UNIREF evalue=0.0 bit_score=1315.0 identity=93.86 coverage=99.7080291970803)
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
CARPRO_14_15
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11624..12256)
DNA (633bp) protein (211aa)
nitrate/nitrite response regulator protein NarP rbh
nitrate/nitrite response regulator protein NarP rbh
Response regulator receiver domain protein n=70 Tax=Propionibacterium RepID=D1YCH8_PROAA (db=UNIREF evalue=1.0e-80 bit_score=302.0 identity=89.05 coverage=99.0521327014218)
seg (db=Seg db_id=seg from=195 to=204)
CARPRO_14_16
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12253..13023)
DNA (771bp) protein (257aa)
histidine kinase
histidine kinase
Histidine kinase n=4 Tax=Propionibacterium RepID=E4ADD2_PROAA (db=UNIREF evalue=2.0e-92 bit_score=342.0 identity=80.16 coverage=96.8871595330739)
seg (db=Seg db_id=seg from=165 to=179)
CARPRO_14_17
unknown

Not on your lists

13262..13522
DNA (261bp) protein (87aa)
13262..13522 + ( gc_cont=0.625)
CARPRO_14_18
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13821..14882
DNA (1062bp) protein (354aa)
ABC-type antimicrobial peptide transport system, permease component rbh
seg (db=Seg db_id=seg from=317 to=336)
seg (db=Seg db_id=seg from=283 to=298)
seg (db=Seg db_id=seg from=265 to=281)
CARPRO_14_19
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14916..15704
DNA (789bp) protein (263aa)
ABC transporter rbh
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=145 to=159 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=222 evalue=4.8e-70)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=2 to=222 evalue=4.8e-70)
CARPRO_14_20
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15661..16725)
DNA (1065bp) protein (355aa)
oxidoreductase, zinc-binding dehydrogenase family protein rbh
oxidoreductase, zinc-binding dehydrogenase family protein rbh
Oxidoreductase, zinc-binding dehydrogenase family protein n=72 Tax=Propionibacterium RepID=D4HDN1_PROAS (db=UNIREF evalue=2.0e-177 bit_score=625.0 identity=88.79 coverage=97.7464788732394)
seg (db=Seg db_id=seg from=182 to=188)
CARPRO_14_21
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17019..17303)
DNA (285bp) protein (95aa)
17019..17303 - ( gc_cont=0.628)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS66424.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
CARPRO_14_22
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17955..18713
DNA (759bp) protein (253aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Propionibacterium humerusii P08 RepID=F3P0L6_9ACTO (db=UNIREF evalue=2.0e-113 bit_score=412.0 identity=86.85 coverage=98.8142292490119)
seg (db=Seg db_id=seg from=109 to=123)
CARPRO_14_23
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18770..19624)
DNA (855bp) protein (285aa)
hypothetical protein
hypothetical protein
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=4 Tax=Propionibacterium RepID=E4ADE3_PROAA (db=UNIREF evalue=2.0e-142 bit_score=508.0 identity=85.21 coverage=98.9473684210526)
PPK2_rel_1 (db=HMMTigr db_id=TIGR03709 from=16 to=277 evalue=1.99999999999999e-101 interpro_id=IPR022300 interpro_description=Polyphosphate:nucleotide phosphotransferase, PPK2 GO=Cellular Component: cellular_component (GO:0005575), Biological Process: polyphosphate metabolic process (GO:0006797), Molecular Function: phosphotransferase activity, phosphate group as acceptor (GO:0016776))
CARPRO_14_24
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19759..20205
DNA (447bp) protein (149aa)
methionine-R-sulfoxide reductase
Methionine-R-sulfoxide reductase n=4 Tax=Propionibacterium RepID=E4ADE5_PROAA (db=UNIREF evalue=8.0e-71 bit_score=268.0 identity=84.46 coverage=98.6577181208054)
PTHR10173:SF0 (db=HMMPanther db_id=PTHR10173:SF0 from=20 to=145 evalue=7.60000011115808e-60)
PTHR10173 (db=HMMPanther db_id=PTHR10173 from=20 to=145 evalue=7.60000011115808e-60)
CARPRO_14_25
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20328..20897
DNA (570bp) protein (190aa)
hypothetical protein rbh
hypothetical protein rbh
Conserved protein n=73 Tax=Propionibacterium RepID=Q6A8V1_PROAC (db=UNIREF evalue=3.0e-90 bit_score=333.0 identity=87.3 coverage=98.9473684210526)
(db=HMMPfam db_id=PF11452 from=2 to=180 evalue=2.1e-64 interpro_id=IPR021555 interpro_description=Protein of unknown function DUF3000)
CARPRO_14_26
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20894..22132
DNA (1239bp) protein (413aa)
3'-5' exonuclease rbh
3'-5' exonuclease rbh
3'-5' exonuclease n=69 Tax=Propionibacterium RepID=D4HDM3_PROAS (db=UNIREF evalue=0.0 bit_score=647.0 identity=81.31 coverage=99.5157384987893)
seg (db=Seg db_id=seg from=256 to=267)
CARPRO_14_27
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22169..24046)
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase rbh
1-deoxy-D-xylulose-5-phosphate synthase rbh
1-deoxy-D-xylulose-5-phosphate synthase n=73 Tax=Propionibacterium RepID=DXS_PROAC (db=UNIREF evalue=0.0 bit_score=1127.0 identity=89.92 coverage=99.6805111821086)
seg (db=Seg db_id=seg from=373 to=383)
CARPRO_14_28
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24243..25379)
DNA (1137bp) protein (379aa)
esterase rbh
seg (db=Seg db_id=seg from=10 to=37)
seg (db=Seg db_id=seg from=338 to=347)
seg (db=Seg db_id=seg from=294 to=308)
CARPRO_14_29
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25590..28259)
DNA (2670bp) protein (890aa)
aconitate hydratase rbh
aconitate hydratase rbh
Aconitate hydratase 1 n=73 Tax=Propionibacterium RepID=D4HDM1_PROAS (db=UNIREF evalue=0.0 bit_score=1704.0 identity=94.83 coverage=99.6629213483146)
seg (db=Seg db_id=seg from=213 to=225)
CARPRO_14_30
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28632..28865)
DNA (234bp) protein (78aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Propionibacterium avidum RepID=M9VI80_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS66415.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Displaying items 1-30 of 33 in total

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