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CARPRO_1_48

Organism: Propionibacterium sp.

near complete RP 53 / 55 MC: 11 BSCG 50 / 51 ASCG 0 / 38
Location: comp(48142..49089)

Top 3 Functional Annotations

Value Algorithm Source
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 263.0
  • Bit_score: 543
  • Evalue 3.60e-152
  • rbh
Integrase catalytic subunit (Fragment) n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JLV0_9ACTO (db=UNIREF evalue=2.0e-98 bit_score=362.0 identity=73.77 coverage=76.5822784810127) similarity UNIREF
DB: UNIREF
  • Identity: 73.77
  • Coverage: 76.58
  • Bit_score: 362
  • Evalue 2.00e-98
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=133 to=307 evalue=6.9e-35 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.90e-35

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTGCGCCTCGCCGCGTACGGATCAGATTTCCAGATTGACGGCCTTCGCACCACGGGGTTGTCGACCGGTCTGCAGGGTCCTGACCAGCTCAGGCCTGCACGTCGCCCCGTCCGGCTACTACGCCGCCCGCAACCGCCCGCCCTCGCACAGGGCCGTGTCGGACGCGGTGGTCGAGAAGCGCCTGCAGGCGCTGCGCGAGCAGCCCTTCAACGCCACCCTGGGGTCGCGCAAGACCTGGCGCCTCCTCAACACCACCGAGCCGACTCTCCCAGTGGCTCGCTGCACCGTCGAGCGGCGCATGCGGGCCCTCGGGATGGTCGGCATCGGGCCGGGACGCTCGATCCGTACCACTCGGCCCGCGGCCTGCTCACGCCAGCCTGCGGACCTGGTCCGCAGGGACTTCACCGCCGAGCATCCCAACCTGCGGTGGGTCGTGGACTTCACCTACGTCCGCACCTGGTCGGGGTTCTGCTACACAGCCTTCGTGATGGACCTCTACTCCCGCCGGATCGTGGGGTGGTCGACCTTCAGCCGGATGGACACCGACTTCGTCCTCTCAGCTCTCGAGCACGCCGTGTGGCAGCGCAAGGACCGTGACGGGCGCAGCCTGGCCGGGCTGGTGCACCACTCGGACCACGGATCGCAATATCTATCGATTCGCTACACCGGCCGCCTCCTGAGTGAAGGCATCGAGGCGTCCACCGGCGCTGTGGGGTCCTCCTACGACAACGCGGCCGCCGAGGCACTGAACAAGTCCTACAAGCGTGAGCTCGTCTGGACCCGATCATGGAAGGGCCGAGACGACCTCGAGGCCGCCACCGCCTCGTGGGTCGAGTGGTACAACCACACCCGACCTCACCGCACCAACCCCGACGAGCTACCACCAGCCACCGTTGAGGACCGCTACTACGATCACACCACCACGCCGGCGAGCGCCGCCGCGTGA
PROTEIN sequence
Length: 316
MCASPRTDQISRLTAFAPRGCRPVCRVLTSSGLHVAPSGYYAARNRPPSHRAVSDAVVEKRLQALREQPFNATLGSRKTWRLLNTTEPTLPVARCTVERRMRALGMVGIGPGRSIRTTRPAACSRQPADLVRRDFTAEHPNLRWVVDFTYVRTWSGFCYTAFVMDLYSRRIVGWSTFSRMDTDFVLSALEHAVWQRKDRDGRSLAGLVHHSDHGSQYLSIRYTGRLLSEGIEASTGAVGSSYDNAAAEALNKSYKRELVWTRSWKGRDDLEAATASWVEWYNHTRPHRTNPDELPPATVEDRYYDHTTTPASAAA*