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CARCAL_216

Alias: CARCAL_57

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARCAL_216_1
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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155..1330
DNA (1176bp) protein (392aa)
Candidapepsin-1 n=2 Tax=Candida albicans RepID=CARP1_CANAL (db=UNIREF evalue=0.0 bit_score=783.0 identity=99.74 coverage=99.4897959183673)
SAP1; secretory aspartyl proteinase SAP1p (db=KEGG evalue=0.0 bit_score=783.0 identity=99.49 coverage=99.4897959183673)
ASP_PROTEASE (db=PatternScan db_id=PS00141 from=264 to=275 evalue=0.0 interpro_id=IPR001969 interpro_description=Peptidase aspartic, active site GO=Molecular Function: aspartic-type endopeptidase activity (GO:0004190), Biological Process: proteolysis (GO:0006508))
CARCAL_216_2
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(1496..3088)
DNA (1593bp) protein (531aa)
Potential mitochondrial nonproton-pumping NADH dehydrogenase n=3 Tax=Candida RepID=Q5A8N5_CANAL (db=UNIREF evalue=0.0 bit_score=1046.0 identity=99.62 coverage=99.623352165725)
pyridine nucleotide-disulfide oxidoreductase
pyridine nucleotide-disulfide oxidoreductase
seg (db=Seg db_id=seg from=218 to=225)
CARCAL_216_3
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(4146..6011)
DNA (1866bp) protein (622aa)
CSR1; similar to S. cerevisiae CSR1 (YLR380W) phosphatidylinositol transporter involved in cell wall biogenesis (db=KEGG evalue=0.0 bit_score=1097.0 identity=100.0 coverage=99.6784565916399)
Phosphatidylinositol transfer protein, putative n=3 Tax=Candida RepID=B9WJ13_CANDC (db=UNIREF evalue=0.0 bit_score=1041.0 identity=92.78 coverage=99.6784565916399)
CRAL_TRIO (db=ProfileScan db_id=PS50191 from=382 to=530 evalue=0.0 interpro_id=IPR001251 interpro_description=Cellular retinaldehyde-binding/triple function, C-terminal)
CARCAL_216_4
unknown

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6855..7007
DNA (153bp) protein (51aa)
6855..7007 + (rbs_motif=None rbs_spacer=None)
CARCAL_216_5
unknown

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7074..7202
DNA (129bp) protein (43aa)
7074..7202 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
CARCAL_216_6
unknown

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comp(7782..7889)
DNA (108bp) protein (36aa)
7782..7889 - (rbs_motif=None rbs_spacer=None)
CARCAL_216_7
unknown

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comp(9018..9215)
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=3 to=14)
CARCAL_216_8
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(9526..11526)
DNA (2001bp) protein (667aa)
Potential nucleoporin Nup1p n=3 Tax=Candida albicans RepID=Q5A8P2_CANAL (db=UNIREF evalue=0.0 bit_score=731.0 identity=97.59 coverage=86.8065967016492)
monX; cell wall surface anchor family protein, Ser rich
monX; cell wall surface anchor family protein, Ser rich
seg (db=Seg db_id=seg from=640 to=660)
CARCAL_216_9
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(11546..12439)
DNA (894bp) protein (298aa)
NUP1; similar to X.laevis NUP153 and to S. cerevisiae NUP1 (YOR098C) nuclear pore protein with XFXFG motifs (db=KEGG evalue=1.0e-157 bit_score=558.0 identity=99.31 coverage=96.6442953020134)
Potential nucleoporin Nup1p n=3 Tax=Candida albicans RepID=Q5A8P2_CANAL (db=UNIREF evalue=2.0e-157 bit_score=558.0 identity=99.31 coverage=96.6442953020134)
seg (db=Seg db_id=seg from=203 to=211)
seg (db=Seg db_id=seg from=290 to=297)
CARCAL_216_10
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(12442..13233)
DNA (792bp) protein (264aa)
NUP1; similar to X.laevis NUP153 and to S. cerevisiae NUP1 (YOR098C) nuclear pore protein with XFXFG motifs (db=KEGG evalue=9.0e-124 bit_score=446.0 identity=96.89 coverage=83.3333333333333)
Potential nucleoporin Nup1p n=3 Tax=Candida albicans RepID=Q5A8P2_CANAL (db=UNIREF evalue=1.0e-123 bit_score=446.0 identity=96.89 coverage=83.3333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
seg (db=Seg db_id=seg from=239 to=249)
CARCAL_216_11
unknown

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13479..13709
DNA (231bp) protein (77aa)
seg (db=Seg db_id=seg from=3 to=19)
CARCAL_216_12
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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13842..15812
DNA (1971bp) protein (657aa)
Mitochondrial leucyl-tRNA synthetase, putative n=3 Tax=Candida RepID=B9WJ15_CANDC (db=UNIREF evalue=0.0 bit_score=1242.0 identity=94.82 coverage=93.7595129375951)
leucyl-tRNA synthetase
leucyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=66 to=77 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
CARCAL_216_13
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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15812..16807
DNA (996bp) protein (332aa)
Suspect SCG annotation. See neighboring gene [CARCAL_216_12].
leucyl-tRNA synthetase (EC:6.1.1.4)
seg (db=Seg db_id=seg from=314 to=321)
ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES (db=HMMPanther db_id=PTHR11946 from=14 to=283 evalue=1.0e-86)
CARCAL_216_14
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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16807..17250
DNA (444bp) protein (148aa)
NAM2; potential tRNA synthetase similar to S. cerevisiae NAM2 (YLR382C) Leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] (db=KEGG evalue=1.0e-74 bit_score=280.0 identity=99.26 coverage=91.2162162162162)
Anticodon_1 (db=HMMPfam db_id=PF08264 from=11 to=95 evalue=8.7e-10 interpro_id=IPR013155 interpro_description=Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (db=superfamily db_id=SSF47323 from=19 to=94 evalue=5.5e-06 interpro_id=IPR009080 interpro_description=Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process:
Leucine-tRNA ligase {ECO:0000313|EMBL:KHC82745.1}; TaxID=237561 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Loddero
CARCAL_216_15
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(17416..19722)
DNA (2307bp) protein (769aa)
similar to S. cerevisiae YGR150C; has 4 potential pentatricopeptide (PPR) repeats (db=KEGG evalue=0.0 bit_score=1482.0 identity=98.7 coverage=99.739921976593)
Uncharacterized protein YGR150C orthologue, putative n=4 Tax=Candida RepID=B9WJ16_CANDC (db=UNIREF evalue=0.0 bit_score=1356.0 identity=90.64 coverage=99.3498049414824)
seg (db=Seg db_id=seg from=28 to=45)
CARCAL_216_16
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

20123..24925
DNA (4803bp) protein (1601aa)
Uncharacterized protein YOR093C orthologue, putative n=3 Tax=Candida RepID=B9WJ17_CANDC (db=UNIREF evalue=0.0 bit_score=3068.0 identity=96.75 coverage=99.6252342286071)
AMP-dependent synthetase and ligase (EC:5.1.1.11)
AMP-dependent synthetase and ligase (EC:5.1.1.11)
seg (db=Seg db_id=seg from=14 to=40)
CARCAL_216_17
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

27487..28593
DNA (1107bp) protein (369aa)
Putative uncharacterized protein APA2 n=3 Tax=Candida albicans RepID=Q5AC42_CANAL (db=UNIREF evalue=4.0e-163 bit_score=577.0 identity=98.64 coverage=99.4579945799458)
APA2; ATP adenylyltransferase II (db=KEGG evalue=4.0e-163 bit_score=577.0 identity=98.64 coverage=99.4579945799458)
seg (db=Seg db_id=seg from=156 to=175)
CARCAL_216_18
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

28849..29232
DNA (384bp) protein (128aa)
QCR7; Ubiquinol cytochrome-c reductase subunit 7; K00417 ubiquinol-cytochrome c reductase subunit 7 [EC:1.10.2.2] (db=KEGG evalue=3.0e-60 bit_score=233.0 identity=100.0 coverage=98.4375)
Cyt_bd_ubiquinol_oxidase_14kDa (db=BlastProDom db_id=PD008153 from=15 to=125 evalue=0.0 interpro_id=IPR003197 interpro_description=Cytochrome d ubiquinol oxidase, 14kDa subunit GO=Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122), Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121))
Cyt_bd_Ubol_Oase_14kDa-su (db=Gene3D db_id=G3DSA:1.10.1090.10 from=3 to=127 evalue=1.2000011745814e-42 interpro_id=IPR003197 interpro_description=Cytochrome d ubiquinol oxidase, 14kDa subunit GO=Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122), Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121))
Cyt_bd_Ubol_Oase_14kDa-su (db=superfamily db_id=SSF81524 from=3 to=127 evalue=1.5e-41 interpro_id=IPR003197 interpro_description=Cytochrome d ubiquinol oxidase, 14kDa subunit GO=Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122), Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121))
CARCAL_216_19
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(29570..30160)
DNA (591bp) protein (197aa)
DIC1; likely mitochondrial carrier protein similar to S. cerevisiae DIC1 (YLR348C) mitochondrial dicarboxylate-phosphate exchange protein (db=KEGG evalue=2.0e-98 bit_score=361.0 identity=99.49 coverage=98.9847715736041)
Potential mitochondrial dicarboxylate transporter n=2 Tax=Candida albicans RepID=Q5ABS2_CANAL (db=UNIREF evalue=2.0e-98 bit_score=361.0 identity=99.49 coverage=98.9847715736041)
seg (db=Seg db_id=seg from=126 to=143)
CARCAL_216_20
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(30111..30668)
DNA (558bp) protein (186aa)
DIC1; likely mitochondrial carrier protein similar to S. cerevisiae DIC1 (YLR348C) mitochondrial dicarboxylate-phosphate exchange protein (db=KEGG evalue=4.0e-56 bit_score=220.0 identity=85.94 coverage=65.5913978494624)
Potential mitochondrial dicarboxylate transporter n=2 Tax=Candida albicans RepID=Q5ABS2_CANAL (db=UNIREF evalue=4.0e-56 bit_score=220.0 identity=85.94 coverage=65.5913978494624)
MITOCHONDRIAL CARRIER PROTEIN RELATED (db=HMMPanther db_id=PTHR11896 from=48 to=166 evalue=7.4e-43 interpro_id=IPR001993 interpro_description=Mitochondrial substrate carrier GO=Molecular Function: binding (GO:0005488), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020), Biological Process: transmembrane transport (GO:0055085))
MITOCHONDRIAL DICARBOXYLATE CARRIER (db=HMMPanther db_id=PTHR11896:SF29 from=48 to=166 evalue=7.4e-43)
CARCAL_216_21
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(32029..33138)
DNA (1110bp) protein (370aa)
similar to rna binding protein-putative pre mrna splicing factor (db=KEGG evalue=3.0e-155 bit_score=551.0 identity=99.72 coverage=95.6756756756757)
Putative uncharacterized protein n=3 Tax=Candida albicans RepID=Q5AC45_CANAL (db=UNIREF evalue=3.0e-155 bit_score=551.0 identity=99.72 coverage=95.6756756756757)
seg (db=Seg db_id=seg from=356 to=368)
seg (db=Seg db_id=seg from=249 to=286)
CARCAL_216_22
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(34287..35534)
DNA (1248bp) protein (416aa)
similar to histidine kinase A (db=KEGG evalue=6.0e-139 bit_score=497.0 identity=99.08 coverage=78.3653846153846)
Putative uncharacterized protein n=3 Tax=Candida albicans RepID=C4YSG7_CANAL (db=UNIREF evalue=2.0e-137 bit_score=493.0 identity=96.96 coverage=78.3653846153846)
seg (db=Seg db_id=seg from=356 to=374)
seg (db=Seg db_id=seg from=344 to=351)
CARCAL_216_23
unknown

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39784..39948
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=2 to=15)
seg (db=Seg db_id=seg from=28 to=43)
CARCAL_216_24
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

40294..41007
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=3 Tax=Candida albicans RepID=Q5ABS5_CANAL (db=UNIREF evalue=1.0e-52 bit_score=209.0 identity=96.69 coverage=63.0252100840336)
similar to mucin-like protein (db=KEGG evalue=1.0e-52 bit_score=209.0 identity=96.69 coverage=63.0252100840336)
seg (db=Seg db_id=seg from=3 to=25)
seg (db=Seg db_id=seg from=47 to=63)
CARCAL_216_25
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

41231..42679
DNA (1449bp) protein (483aa)
ARP4; potential NuA4 histone acetyltransferase complex component; K11400 actin-related protein 4 (db=KEGG evalue=0.0 bit_score=900.0 identity=99.79 coverage=96.6873706004141)
Actin-related protein 4 n=3 Tax=Candida albicans RepID=ARP4_CANAL (db=UNIREF evalue=0.0 bit_score=890.0 identity=98.93 coverage=96.6873706004141)
seg (db=Seg db_id=seg from=284 to=291)
seg (db=Seg db_id=seg from=248 to=261)
CARCAL_216_26
unknown

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comp(43350..43439)
DNA (90bp) protein (30aa)
seg (db=Seg db_id=seg from=6 to=29)
Displaying 26 items

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