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CARCAL_281

Alias: CARCAL_96

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARCAL_281_1
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

2833..3942
DNA (1110bp) protein (370aa)
weak similarity to viral protein (db=KEGG evalue=1.0e-133 bit_score=479.0 identity=90.19 coverage=99.1891891891892)
Putative uncharacterized protein n=3 Tax=Candida albicans RepID=C4YFH7_CANAL (db=UNIREF evalue=1.0e-132 bit_score=476.0 identity=88.06 coverage=99.4594594594595)
seg (db=Seg db_id=seg from=288 to=325)
seg (db=Seg db_id=seg from=223 to=231)
CARCAL_281_2
unknown

Not on your lists

comp(5948..6184)
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=48 to=57)
CARCAL_281_3
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(6913..7566)
DNA (654bp) protein (218aa)
C-8 sterol isomerase n=2 Tax=Candida RepID=Q5ABE4_CANAL (db=UNIREF evalue=1.0e-122 bit_score=442.0 identity=100.0 coverage=99.0825688073395)
hypothetical protein
hypothetical protein
ERG2_Sigma1R (db=HMMPfam db_id=PF04622 from=12 to=217 evalue=2.90000000000003e-79 interpro_id=IPR006716 interpro_description=ERG2/sigma1 receptor-like GO=Molecular Function: C-8 sterol isomerase activity (GO:0000247), Cellular Component: endoplasmic reticulum (GO:0005783), Biological Process: ergosterol biosynthetic process (GO:0006696))
CARCAL_281_4
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

7911..8570
DNA (660bp) protein (220aa)
similar to Pf gametocytogenesis onset-specific protein; K07432 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] (db=KEGG evalue=3.0e-106 bit_score=387.0 identity=99.55 coverage=99.0909090909091)
UDP-N-acetylglucosamine transferase subunit ALG13 n=2 Tax=Candida albicans RepID=ALG13_CANAL (db=UNIREF evalue=3.0e-106 bit_score=387.0 identity=99.55 coverage=99.0909090909091)
seg (db=Seg db_id=seg from=27 to=40)
CARCAL_281_5
unknown

Not on your lists

comp(10777..10893)
DNA (117bp) protein (39aa)
seg (db=Seg db_id=seg from=24 to=38)
CARCAL_281_6
unknown

Not on your lists

comp(10836..10988)
DNA (153bp) protein (51aa)
10836..10988 - (rbs_motif=TAA rbs_spacer=6bp)
CARCAL_281_7
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

11036..12835
DNA (1800bp) protein (600aa)
MATE family transporter, multltidrug/sodium efflux pump, putative n=3 Tax=Candida RepID=B9W6N4_CANDC (db=UNIREF evalue=0.0 bit_score=1011.0 identity=87.52 coverage=99.6666666666667)
MATE efflux family protein
MATE efflux family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=538 to=560)
CARCAL_281_8
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(13253..14980)
DNA (1728bp) protein (576aa)
similar to histidine kinase A (db=KEGG evalue=0.0 bit_score=832.0 identity=97.4 coverage=99.6527777777778)
Putative uncharacterized protein n=2 Tax=Candida albicans RepID=Q5ABE8_CANAL (db=UNIREF evalue=0.0 bit_score=832.0 identity=97.4 coverage=99.6527777777778)
seg (db=Seg db_id=seg from=522 to=537)
seg (db=Seg db_id=seg from=475 to=502)
CARCAL_281_9
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

19549..20295
DNA (747bp) protein (249aa)
hypothetical protein (db=KEGG evalue=3.0e-130 bit_score=467.0 identity=99.56 coverage=90.7630522088353)
Putative uncharacterized protein n=2 Tax=Candida albicans RepID=C4YFH1_CANAL (db=UNIREF evalue=9.0e-130 bit_score=466.0 identity=99.12 coverage=90.7630522088353)
seg (db=Seg db_id=seg from=3 to=21)
CARCAL_281_10
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

21008..22015
DNA (1008bp) protein (336aa)
ATG3; similar to S. cerevisiae ATG3 (YNR007C) part of ubiquitin-like system that mediates Atg8-phosphatidylethanolamine conjugation required for protein-vacuolar targeting and autophagy; K08343 autophagy-related protein 3 (db=KEGG evalue=2.0e-147 bit_score=525.0 identity=97.91 coverage=98.8095238095238)
Autophagy-related protein 3 n=3 Tax=Candida albicans RepID=ATG3_CANAL (db=UNIREF evalue=2.0e-147 bit_score=525.0 identity=97.91 coverage=98.8095238095238)
seg (db=Seg db_id=seg from=134 to=149)
seg (db=Seg db_id=seg from=157 to=173)
CARCAL_281_11
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

22935..24839
DNA (1905bp) protein (635aa)
LRO1; similar to diacylglycerol acyltransferase; storage lipid synthesis; K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] (db=KEGG evalue=0.0 bit_score=1149.0 identity=99.35 coverage=97.3228346456693)
Phospholipid:diacylglycerol acyltransferase, putative n=3 Tax=Candida RepID=B9W6N8_CANDC (db=UNIREF evalue=0.0 bit_score=1119.0 identity=96.8 coverage=93.3858267716535)
seg (db=Seg db_id=seg from=517 to=535)
seg (db=Seg db_id=seg from=6 to=25)
CARCAL_281_12
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

27265..28890
DNA (1626bp) protein (542aa)
MCM1; Cell-type-specific transcription component (db=KEGG evalue=0.0 bit_score=787.0 identity=98.71 coverage=99.6309963099631)
Putative uncharacterized protein MCM1 n=2 Tax=Candida albicans RepID=Q5ABF3_CANAL (db=UNIREF evalue=0.0 bit_score=787.0 identity=98.71 coverage=99.6309963099631)
seg (db=Seg db_id=seg from=451 to=471)
seg (db=Seg db_id=seg from=310 to=321)
CARCAL_281_13
unknown

Not on your lists

comp(29328..29525)
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=43 to=59)
seg (db=Seg db_id=seg from=12 to=26)
CARCAL_281_14
unknown

Not on your lists

comp(29547..29747)
DNA (201bp) protein (67aa)
29547..29747 - (rbs_motif=TAA rbs_spacer=6bp)
CARCAL_281_15
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

30282..31124
DNA (843bp) protein (281aa)
has ATP/GTP and calcium binding site domains (db=KEGG evalue=9.0e-146 bit_score=519.0 identity=99.2 coverage=88.6120996441281)
Mitochondrial Rho GTPase 1 n=1 Tax=Candida albicans RepID=GEM1_CANAL (db=UNIREF evalue=3.0e-145 bit_score=517.0 identity=99.2 coverage=88.6120996441281)
RAS-RELATED GTPASE (db=HMMPanther db_id=PTHR11708 from=118 to=229 evalue=7.5e-46)
CARCAL_281_16
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

31091..31414
DNA (324bp) protein (108aa)
has ATP/GTP and calcium binding site domains (db=KEGG evalue=5.0e-56 bit_score=219.0 identity=99.07 coverage=98.1481481481482)
Mitochondrial Rho GTPase 1 n=1 Tax=Candida albicans RepID=GEM1_CANAL (db=UNIREF evalue=1.0e-54 bit_score=214.0 identity=97.2 coverage=98.1481481481482)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
Mitochondrial Rho GTPase {ECO:0000256|PIRNR:PIRNR037488}; EC=3.6.5.- {ECO:0000256|PIRNR:PIRNR037488};; TaxID=1094992 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
CARCAL_281_17
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

31629..31976
DNA (348bp) protein (116aa)
RRS1; similar to S. cerevisiae RRS1 (YOR294W) part of coordinate regulator of rRNA and ribosomal protein gene synthesis; interacts with ribosomal protein L11 (db=KEGG evalue=9.0e-48 bit_score=191.0 identity=100.0 coverage=81.0344827586207)
Ribosome biogenesis [nuclear export] protein, putative n=4 Tax=Candida RepID=B9W6P1_CANDC (db=UNIREF evalue=1.0e-47 bit_score=191.0 identity=100.0 coverage=81.0344827586207)
RRS1 (db=HMMPfam db_id=PF04939 from=17 to=96 evalue=1.4e-16 interpro_id=IPR007023 interpro_description=Ribosomal biogenesis regulatory protein GO=Cellular Component: nucleus (GO:0005634), Biological Process: ribosome biogenesis (GO:0042254))
Uncharacterized protein {ECO:0000313|EMBL:KHC40144.1}; TaxID=1094998 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lo
CARCAL_281_18
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

31973..32332
DNA (360bp) protein (120aa)
RRS1; similar to S. cerevisiae RRS1 (YOR294W) part of coordinate regulator of rRNA and ribosomal protein gene synthesis; interacts with ribosomal protein L11 (db=KEGG evalue=5.0e-62 bit_score=239.0 identity=99.16 coverage=98.3333333333333)
Ribosome biogenesis [nuclear export] protein, putative n=4 Tax=Candida RepID=B9W6P1_CANDC (db=UNIREF evalue=1.0e-60 bit_score=234.0 identity=96.64 coverage=98.3333333333333)
coiled-coil (db=Coil db_id=coil from=93 to=114 evalue=NA)
RRS1 (db=HMMPfam db_id=PF04939 from=2 to=114 evalue=5.6e-45 interpro_id=IPR007023 interpro_description=Ribosomal biogenesis regulatory protein GO=Cellular Component: nucleus (GO:0005634), Biological Process: ribosome biogenesis (GO:0042254))
CARCAL_281_19
unknown

Not on your lists

comp(32885..33118)
DNA (234bp) protein (78aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
CARCAL_281_20
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

33169..33660
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Candida albicans RepID=Q5ABF7_CANAL (db=UNIREF evalue=4.0e-64 bit_score=246.0 identity=98.53 coverage=82.3170731707317)
putative histone protein
seg (db=Seg db_id=seg from=60 to=72)
coiled-coil (db=Coil db_id=coil from=6 to=44 evalue=NA)
CARCAL_281_21
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

33657..33854
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Candida albicans RepID=C4YFG5_CANAL (db=UNIREF evalue=9.0e-14 bit_score=79.0 identity=95.92 coverage=72.7272727272727)
seg (db=Seg db_id=seg from=54 to=65)
seg (db=Seg db_id=seg from=40 to=49)
Upstream activation factor subunit UAF30 {ECO:0000313|EMBL:KGR23159.1}; TaxID=1094992 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycet
CARCAL_281_22
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

34428..38264
DNA (3837bp) protein (1279aa)
may be involved in bud-site selection (db=KEGG evalue=0.0 bit_score=2518.0 identity=99.68 coverage=98.5926505082095)
Putative uncharacterized protein n=2 Tax=Candida RepID=B9W6P3_CANDC (db=UNIREF evalue=0.0 bit_score=2419.0 identity=95.1 coverage=98.5926505082095)
coiled-coil (db=Coil db_id=coil from=1204 to=1225 evalue=NA)
seg (db=Seg db_id=seg from=743 to=755)
CARCAL_281_23
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(38532..42083)
DNA (3552bp) protein (1184aa)
SIN3; similar to C terminus of S. cerevisiae SIN3 (YOL004W) histone deacetylase complex DNA binding protein component; K11644 paired amphipathic helix protein Sin3a (db=KEGG evalue=0.0 bit_score=1941.0 identity=99.55 coverage=94.4256756756757)
Sin3p-Rpd3p histone-deacetylase complex, DNA binding subunit, putative n=2 Tax=Candida RepID=B9W6P4_CANDC (db=UNIREF evalue=0.0 bit_score=1895.0 identity=91.41 coverage=99.8310810810811)
seg (db=Seg db_id=seg from=486 to=499)
coiled-coil (db=Coil db_id=coil from=717 to=738 evalue=NA)
CARCAL_281_24
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

43929..44180
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase II [13.6 kda] subunit, putative (EC:2.7.7.6); K03008 DNA-directed RNA polymerase II subunit J (db=KEGG evalue=2.0e-39 bit_score=164.0 identity=95.18 coverage=97.6190476190476)
DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=2 Tax=Candida RepID=B9W6P5_CANDC (db=UNIREF evalue=2.0e-39 bit_score=164.0 identity=95.18 coverage=97.6190476190476)
DNA-DIRECTED RNA POLYMERASE II 13.3 KDA POLYPEPTIDE (db=HMMPanther db_id=PTHR13946:SF16 from=1 to=83 evalue=8.9e-23)
DNA-DIRECTED RNA POLYMERASE I,II,III (db=HMMPanther db_id=PTHR13946 from=1 to=83 evalue=8.9e-23)
CARCAL_281_25
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(44468..46429)
DNA (1962bp) protein (654aa)
Cell cycle serine/threonine-protein kinase, putative n=2 Tax=Candida RepID=B9W6P6_CANDC (db=UNIREF evalue=0.0 bit_score=1296.0 identity=98.91 coverage=97.7064220183486)
serine/threonine protein kinase
serine/threonine protein kinase
seg (db=Seg db_id=seg from=42 to=50)
CARCAL_281_26
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(47700..50822)
DNA (3123bp) protein (1041aa)
Histone-lysine N-methyltransferase, H3 lysine-4 specific n=3 Tax=Candida RepID=SET1_CANAL (db=UNIREF evalue=0.0 bit_score=1628.0 identity=99.4 coverage=96.6378482228626)
Proteins containing SET domain
Proteins containing SET domain
seg (db=Seg db_id=seg from=85 to=96)
CARCAL_281_27
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

51297..51770
DNA (474bp) protein (158aa)
hypothetical protein (db=KEGG evalue=1.0e-44 bit_score=181.0 identity=78.52 coverage=84.8101265822785)
seg (db=Seg db_id=seg from=9 to=20)
seg (db=Seg db_id=seg from=55 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
CARCAL_281_28
Candida albicans, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

52014..52244
DNA (231bp) protein (77aa)
hypothetical protein (db=KEGG evalue=1.0e-33 bit_score=145.0 identity=96.05 coverage=97.4025974025974)
L35p-like (db=superfamily db_id=SSF143034 from=15 to=73 evalue=6.7e-09)
Ribosomal_L35p (db=HMMPfam db_id=PF01632 from=16 to=44 evalue=1.7e-06 interpro_id=IPR021137 interpro_description=Ribosomal protein L35 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L35 {ECO:0000313|EMBL:KGR21869.1}; TaxID=1094989 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodd
Displaying 28 items

View Taxonomy