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CARFMA_43

Alias: CARFMA_107

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_43_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..308)
DNA (306bp) protein (102aa)
glutamine synthase type III
Glutamine synthase type III n=2 Tax=Finegoldia magna RepID=B0S220_FINM2 (db=UNIREF evalue=2.0e-41 bit_score=171.0 identity=96.08 coverage=99.0196078431373)
seg (db=Seg db_id=seg from=72 to=88)
GSIII_N (db=HMMPfam db_id=PF12437 from=5 to=81 evalue=2.4e-34 interpro_id=IPR022147 interpro_description=Glutamine synthetase type III N-terminal)
CARFMA_43_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(301..537)
DNA (237bp) protein (79aa)
Glutamine synthase type III n=2 Tax=Finegoldia magna RepID=B0S220_FINM2 (db=UNIREF evalue=3.0e-32 bit_score=140.0 identity=96.92 coverage=81.0126582278481)
glutamine synthase type III
GSIII_N (db=HMMPfam db_id=PF12437 from=3 to=67 evalue=3.5e-20 interpro_id=IPR022147 interpro_description=Glutamine synthetase type III N-terminal)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EFH92753.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EFH92753.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
CARFMA_43_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(654..1118)
DNA (465bp) protein (155aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
CARFMA_43_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1118..1459)
DNA (342bp) protein (114aa)
ATP-dependent zinc metallopeptidase
seg (db=Seg db_id=seg from=99 to=110)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
FtsH protease domain-like (db=superfamily db_id=SSF140990 from=1 to=80 evalue=1.6e-17)
CARFMA_43_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1419..1646)
DNA (228bp) protein (76aa)
ATP-dependent zinc metallopeptidase
Peptidase_M41 (db=HMMPfam db_id=PF01434 from=1 to=70 evalue=2.1e-24 interpro_id=IPR000642 interpro_description=Peptidase M41 GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508))
CELL DIVISION PROTEIN FTSH HOMOLOG (db=HMMPanther db_id=PTHR23076:SF10 from=1 to=73 evalue=1.7e-23)
METALLOPROTEASE M41 FTSH (db=HMMPanther db_id=PTHR23076 from=1 to=73 evalue=1.7e-23)
CARFMA_43_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1643..1885)
DNA (243bp) protein (81aa)
ATP-dependent zinc metallopeptidase
Peptidase_M41 (db=HMMPfam db_id=PF01434 from=9 to=63 evalue=1.2e-17 interpro_id=IPR000642 interpro_description=Peptidase M41 GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508))
METALLOPROTEASE M41 FTSH (db=HMMPanther db_id=PTHR23076 from=1 to=63 evalue=2.2e-16)
CELL DIVISION PROTEIN FTSH HOMOLOG (db=HMMPanther db_id=PTHR23076:SF10 from=1 to=63 evalue=2.2e-16)
Displaying 6 items

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