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CARFMA_65

Alias: CARFMA_87

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_65_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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31..318
DNA (288bp) protein (96aa)
30S ribosomal protein S6
30S ribosomal protein S6 n=2 Tax=Finegoldia magna RepID=RS6_FINM2 (db=UNIREF evalue=8.0e-48 bit_score=192.0 identity=100.0 coverage=97.9166666666667)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=91 evalue=3.0e-31 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=94 evalue=9.0e-29 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
CARFMA_65_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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339..854
DNA (516bp) protein (172aa)
phage-related single-strand DNA-binding protein
Single-stranded DNA-binding protein n=2 Tax=Finegoldia magna RepID=B0S2G8_FINM2 (db=UNIREF evalue=1.0e-75 bit_score=285.0 identity=98.83 coverage=98.8372093023256)
seg (db=Seg db_id=seg from=118 to=146)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=171 evalue=1.5e-41 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
CARFMA_65_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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875..1099
DNA (225bp) protein (75aa)
30S ribosomal protein S18 n=2 Tax=Finegoldia magna RepID=B0S2G7_FINM2 (db=UNIREF evalue=2.0e-35 bit_score=150.0 identity=100.0 coverage=97.3333333333333)
30S ribosomal protein S18
RIBOSOMAL_S18 (db=PatternScan db_id=PS00057 from=22 to=45 evalue=0.0 interpro_id=IPR018275 interpro_description=Ribosomal protein S18, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=2 to=74 evalue=3.4e-31 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
CARFMA_65_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1909..2100
DNA (192bp) protein (64aa)
branched-chain amino acid aminotransferase
Branched-chain-amino-acid aminotransferase n=2 Tax=Finegoldia magna RepID=B0S2G6_FINM2 (db=UNIREF evalue=3.0e-27 bit_score=124.0 identity=96.77 coverage=95.3125)
D-aminoacid aminotransferase-like PLP-dependent enzymes (db=superfamily db_id=SSF56752 from=4 to=64 evalue=1.8e-10 interpro_id=IPR001544 interpro_description=Aminotransferase, class IV GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.20.10.10 from=4 to=64 evalue=2.4e-08)
Displaying 4 items

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