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CARFMA_96

Alias: CARFMA_192

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_96_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..166)
DNA (165bp) protein (55aa)
Pseudouridine synthase n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HG21_PEPMA (db=UNIREF evalue=1.0e-20 bit_score=101.0 identity=89.09 coverage=98.1818181818182)
putative 23S RNA-specific pseudouridylate synthase
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EFH92787.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFH92787.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae;
CARFMA_96_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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217..1077
DNA (861bp) protein (287aa)
inorganic polyphosphate/ATP-NAD kinase
inorganic polyphosphate/ATP-NAD kinase
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Finegoldia magna RepID=PPNK_FINM2 (db=UNIREF evalue=5.0e-149 bit_score=530.0 identity=99.62 coverage=91.2891986062718)
seg (db=Seg db_id=seg from=12 to=23)
CARFMA_96_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1131..1391)
DNA (261bp) protein (87aa)
putative penicillin-binding protein
seg (db=Seg db_id=seg from=39 to=55)
Transpeptidase (db=HMMPfam db_id=PF00905 from=16 to=75 evalue=2.5e-12 interpro_id=IPR001460 interpro_description=Penicillin-binding protein, transpeptidase GO=Molecular Function: penicillin binding (GO:0008658), Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273))
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=19 to=86 evalue=3.4e-12 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
Displaying 3 items

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