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CARFMA_253

Alias: CARFMA_150

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_253_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..379)
DNA (378bp) protein (126aa)
Thymidylate kinase n=2 Tax=Finegoldia magna RepID=KTHY_FINM2 (db=UNIREF evalue=7.0e-65 bit_score=248.0 identity=96.83 coverage=99.2063492063492)
thymidylate kinase
THYMIDYLATE_KINASE (db=PatternScan db_id=PS01331 from=90 to=102 evalue=0.0 interpro_id=IPR018095 interpro_description=Thymidylate kinase, conserved site GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=126 evalue=1.0e-41)
CARFMA_253_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(450..773)
DNA (324bp) protein (108aa)
50S ribosomal protein L25 n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HFQ1_PEPMA (db=UNIREF evalue=3.0e-44 bit_score=180.0 identity=96.81 coverage=86.1111111111111)
50S ribosomal protein L25
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=2 to=96 evalue=1.4e-12 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.170.120.20 from=1 to=96 evalue=8.3e-12 interpro_id=IPR020057 interpro_description=Ribosomal protein L25, beta domain)
CARFMA_253_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(868..1062)
DNA (195bp) protein (65aa)
50S ribosomal protein L25 n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HFQ1_PEPMA (db=UNIREF evalue=3.0e-26 bit_score=120.0 identity=95.08 coverage=92.3076923076923)
50S ribosomal protein L25
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=6 to=53 evalue=4.5e-13 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=52 evalue=1.3e-10 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
CARFMA_253_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1132..1395)
DNA (264bp) protein (88aa)
sigmaK-factor processing regulatory protein
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
seg (db=Seg db_id=seg from=37 to=51)
CARFMA_253_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1482..1562
DNA (81bp) protein (27aa)
1482..1562 + (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Fi
Displaying 5 items

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