Alias: CARFMA_152
name | lists | location/seqs | annotations | notes |
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CARFMA_259_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3..143)
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Suspect SCG annotation. See neighboring gene [CARFMA_259_2].
30S ribosomal protein S2 n=2 Tax=Finegoldia magna RepID=RS2_FINM2 (db=UNIREF evalue=5.0e-19 bit_score=96.7 identity=97.87 coverage=97.8723404255319)
30S ribosomal protein S2
RIBOSOMAL_S2_2 (db=PatternScan db_id=PS00963 from=5 to=29 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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CARFMA_259_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(191..586)
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30S ribosomal protein S2 n=2 Tax=Finegoldia magna RepID=RS2_FINM2 (db=UNIREF evalue=2.0e-73 bit_score=277.0 identity=99.23 coverage=97.7272727272727)
30S ribosomal protein S2
RIBOSOMAL_S2_1 (db=PatternScan db_id=PS00962 from=6 to=17 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsB_bact: ribosomal protein S2 (db=HMMTigr db_id=TIGR01011 from=3 to=131 evalue=1.2e-53 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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CARFMA_259_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(702..1316)
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topoisomerase I
DNA topoisomerase n=2 Tax=Finegoldia magna RepID=B0S183_FINM2 (db=UNIREF evalue=2.0e-115 bit_score=417.0 identity=95.59 coverage=99.0243902439024)
Prokaryotic type I DNA topoisomerase (db=superfamily db_id=SSF56712 from=1 to=103 evalue=1.5e-20 interpro_id=IPR000380 interpro_description=DNA topoisomerase, type IA, core GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
zf-C4_Topoisom (db=HMMPfam db_id=PF01396 from=89 to=125 evalue=5.3e-18 interpro_id=IPR013498 interpro_description=DNA topoisomerase, type IA, zn finger GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
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CARFMA_259_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1309..1536)
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topoisomerase I
DNA topoisomerase n=2 Tax=Finegoldia magna RepID=B0S183_FINM2 (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=88.33 coverage=77.6315789473684)
seg (db=Seg db_id=seg from=31 to=44)
Topoisom_bac (db=HMMPfam db_id=PF01131 from=2 to=61 evalue=1.2e-13 interpro_id=IPR013497 interpro_description=DNA topoisomerase, type IA, central GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
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