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CARFMA_285

Alias: CARFMA_28

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_285_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1286)
DNA (1284bp) protein (428aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG n=2 Tax=Finegoldia magna RepID=MNMG_FINM2 (db=UNIREF evalue=0.0 bit_score=819.0 identity=98.6 coverage=99.7663551401869)
seg (db=Seg db_id=seg from=384 to=396)
CARFMA_285_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1288..1674)
DNA (387bp) protein (129aa)
tRNA modification GTPase
TRNA MODIFICATION GTPASE TRME (db=HMMPanther db_id=PTHR11649:SF15 from=19 to=128 evalue=1.8e-26)
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=19 to=128 evalue=1.8e-26)
TrmE connector domain (db=superfamily db_id=SSF116878 from=22 to=128 evalue=9.3e-25)
CARFMA_285_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1628..2608)
DNA (981bp) protein (327aa)
tRNA modification GTPase mnmE n=2 Tax=Finegoldia magna RepID=MNME_FINM2 (db=UNIREF evalue=4.0e-177 bit_score=624.0 identity=98.43 coverage=96.9418960244648)
tRNA modification GTPase
tRNA modification GTPase
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=47 to=318 evalue=6.9e-125)
CARFMA_285_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2768..3079)
DNA (312bp) protein (104aa)
putative RNA-binding protein
R3H (db=HMMPfam db_id=PF01424 from=61 to=92 evalue=3.7e-08 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=HMMSmart db_id=SM00393 from=35 to=103 evalue=1.3e-06 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
R3H (db=ProfileScan db_id=PS51061 from=49 to=103 evalue=12.899 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
CARFMA_285_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3043..3348)
DNA (306bp) protein (102aa)
putative RNA-binding protein
coiled-coil (db=Coil db_id=coil from=11 to=41 evalue=NA)
seg (db=Seg db_id=seg from=1 to=43)
seg (db=Seg db_id=seg from=80 to=87)
Displaying 5 items

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