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CARFMA_305

Alias: CARFMA_18

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_305_1
unknown

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comp(1..60)
DNA (60bp) protein (20aa)
1..60 - (rbs_motif=AGxAGG/AGGxGG rbs_spacer=5-10bp)
CARFMA_305_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(603..815)
DNA (213bp) protein (71aa)
Cobalt ABC transporter ATP-binding protein n=2 Tax=Finegoldia magna RepID=B0S3C1_FINM2 (db=UNIREF evalue=9.0e-30 bit_score=132.0 identity=91.43 coverage=97.1830985915493)
cobalt ABC transporter ATP-binding protein
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=4 to=67 evalue=8.8e-23)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=70 evalue=7.9e-21)
CARFMA_305_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(815..1414)
DNA (600bp) protein (200aa)
Cobalt ABC transporter ATP-binding protein n=2 Tax=Finegoldia magna RepID=B0S3C2_FINM2 (db=UNIREF evalue=2.0e-102 bit_score=374.0 identity=94.47 coverage=99.0)
cobalt ABC transporter ATP-binding protein
cobalt ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=65 to=79 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
CARFMA_305_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1425..1643)
DNA (219bp) protein (73aa)
Cobalt ABC transporter ATP-binding protein n=2 Tax=Finegoldia magna RepID=B0S3C2_FINM2 (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=93.55 coverage=83.5616438356164)
cobalt ABC transporter ATP-binding protein
seg (db=Seg db_id=seg from=63 to=72)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=62 evalue=1.7e-17)
CARFMA_305_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1643..2374)
DNA (732bp) protein (244aa)
cobalt ABC transporter permease
cobalt ABC transporter permease
Cobalt ABC transporter permease protein n=2 Tax=Finegoldia magna RepID=B0S3C3_FINM2 (db=UNIREF evalue=1.0e-91 bit_score=339.0 identity=95.47 coverage=99.1803278688525)
seg (db=Seg db_id=seg from=180 to=191)
CARFMA_305_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2371..2760)
DNA (390bp) protein (130aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
Uncharacterized protein {ECO:0000313|EMBL:EFH93231.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
Sensor histidine kinase n=5 Tax=Peptostreptococcus magnus RepID=D6S8V3_PEPMA
CARFMA_305_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2751..2999)
DNA (249bp) protein (83aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
Sensor histidine kinase n=5 Tax=Peptostreptococcus magnus RepID=D6S8V3_PEPMA
CARFMA_305_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3135..3545)
DNA (411bp) protein (137aa)
hypothetical protein
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=15 to=135 evalue=3.3e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=49 to=124 evalue=3.4e-08 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=48 to=128 evalue=0.00025 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
CARFMA_305_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3586..3909)
DNA (324bp) protein (108aa)
Transcription accessory protein n=2 Tax=Finegoldia magna RepID=B0S3C6_FINM2 (db=UNIREF evalue=8.0e-55 bit_score=215.0 identity=98.13 coverage=98.1481481481482)
transcription accessory protein
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=1 to=105 evalue=1.1e-42)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=16 to=107 evalue=1.5e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
CARFMA_305_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3902..4507)
DNA (606bp) protein (202aa)
Transcription accessory protein n=2 Tax=Finegoldia magna RepID=B0S3C6_FINM2 (db=UNIREF evalue=2.0e-96 bit_score=354.0 identity=95.68 coverage=89.6039603960396)
transcription accessory protein
seg (db=Seg db_id=seg from=184 to=191)
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=2 to=183 evalue=3.9e-86)
Displaying 10 items

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