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CARFMA_380

Alias: CARFMA_121

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_380_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..272
DNA (270bp) protein (90aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
Uncharacterized protein {ECO:0000313|EMBL:EFH93286.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
CARFMA_380_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(337..642)
DNA (306bp) protein (102aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Finegoldia magna RepID=B0S3G5_FINM2 (db=UNIREF evalue=2.0e-48 bit_score=194.0 identity=92.08 coverage=98.0392156862745)
N-acetylmuramoyl-L-alanine amidase
CW_binding_2 (db=HMMPfam db_id=PF04122 from=1 to=54 evalue=3.8e-07 interpro_id=IPR007253 interpro_description=Putative cell wall binding repeat 2)
Putative cell wall binding repeat 2 {ECO:0000313|EMBL:EFH93284.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
CARFMA_380_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(636..1406)
DNA (771bp) protein (257aa)
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Finegoldia magna RepID=B0S3G5_FINM2 (db=UNIREF evalue=1.0e-119 bit_score=432.0 identity=99.15 coverage=91.0505836575876)
seg (db=Seg db_id=seg from=3 to=15)
CARFMA_380_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1566..1778
DNA (213bp) protein (71aa)
conserved membrane protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
DUF1393 (db=HMMPfam db_id=PF07155 from=3 to=65 evalue=2.8e-07 interpro_id=IPR009825 interpro_description=Protein of unknown function DUF1393 GO=Cellular Component: membrane (GO:0016020))
Displaying 4 items

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