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CARFMA_390

Alias: CARFMA_296

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CARFMA_390_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..352)
DNA (351bp) protein (117aa)
3-oxoacyl-[acyl-carrier protein] reductase
3-oxoacyl-[acyl-carrier protein] reductase n=2 Tax=Finegoldia magna RepID=B0S1J6_FINM2 (db=UNIREF evalue=8.0e-59 bit_score=228.0 identity=90.6 coverage=99.1452991452991)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=117 evalue=1.6e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=2 to=117 evalue=5.7e-29 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
CARFMA_390_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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469..963
DNA (495bp) protein (165aa)
crossover junction endodeoxyribonuclease
crossover junction endodeoxyribonuclease
Crossover junction endodeoxyribonuclease ruvC n=2 Tax=Finegoldia magna RepID=RUVC_FINM2 (db=UNIREF evalue=2.0e-80 bit_score=300.0 identity=96.34 coverage=98.7878787878788)
seg (db=Seg db_id=seg from=139 to=148)
CARFMA_390_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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972..1130
DNA (159bp) protein (53aa)
holliday junction DNA helicase
RuvA_N (db=HMMPfam db_id=PF01330 from=1 to=53 evalue=2.5e-12 interpro_id=IPR013849 interpro_description=DNA helicase, Holliday junction RuvA type, domain I, bacterial GO=Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Molecular Function: four-way junction helicase activity (GO:0009378))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=53 evalue=6.1e-09 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=53 evalue=0.00082 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
Displaying 3 items

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